C. lupus familiaris Gene: TSEN54 - ENSCAFG00000004798 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000004798
NameTSEN54
DescriptiontRNA splicing endonuclease subunit 54 [Source:HGNC Symbol;Acc:HGNC:27561]
OrganismCanis lupus familiaris (dog)
Synonym(s)sen54, sen54l

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002115jejunum
  • UBERON:0000104life cycle
3.97e3
  • 3.97e3
82.23178
  • 82.23178
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
4.06e3
  • 4.06e3
81.80638
  • 81.80638
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.48e3
  • 4.48e3
  • 5.86e3
79.93015
  • 79.93015
  • 73.78202
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
4.69e3
  • 4.69e3
78.98531
  • 78.98531
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.81e3
  • 4.81e3
  • 7.38e3
78.48379
  • 78.48379
  • 66.94430
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.44e3
  • 5.44e3
  • 6.66e3
  • 7.06e3
  • 7.16e3
75.66273
  • 75.66273
  • 70.20164
  • 68.37274
  • 67.94640
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
5.98e3
  • 5.98e3
73.21333
  • 73.21333
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
6.19e3
  • 6.19e3
72.27297
  • 72.27297
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
6.36e3
  • 6.36e3
71.50725
  • 71.50725
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
6.40e3
  • 6.40e3
71.34605
  • 71.34605
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.69e3
  • 6.69e3
  • 6.84e3
70.04299
  • 70.04299
  • 69.39370
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
6.87e3
  • 6.87e3
  • 7.44e3
69.25367
  • 69.25367
  • 66.70871
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
7.01e3
  • 7.01e3
  • 7.26e3
68.60111
  • 68.60111
  • 67.48164
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
7.10e3
  • 7.10e3
68.19362
  • 68.19362
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.21e3
  • 7.21e3
  • 8.73e3
67.73760
  • 67.73760
  • 60.91259
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.30e3
  • 7.30e3
  • 8.39e3
  • 8.98e3
67.29567
  • 67.29567
  • 62.43507
  • 59.81103
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
7.37e3
  • 7.37e3
66.98639
  • 66.98639
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
7.46e3
  • 7.46e3
66.58289
  • 66.58289
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
7.53e3
  • 7.53e3
66.29500
  • 66.29500
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.63e3
  • 7.63e3
  • 1.01e4
65.84292
  • 65.84292
  • 54.67491
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
7.76e3
  • 7.76e3
65.26509
  • 65.26509
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
7.81e3
  • 7.81e3
65.05015
  • 65.05015
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
7.94e3
  • 7.94e3
64.45459
  • 64.45459
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
8.13e3
  • 8.13e3
63.60380
  • 63.60380
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
8.21e3
  • 8.21e3
63.23661
  • 63.23661
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.27e3
  • 8.27e3
  • 1.07e4
62.99481
  • 62.99481
  • 52.01500
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
8.30e3
  • 8.30e3
62.86047
  • 62.86047
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
8.34e3
  • 8.34e3
62.67688
  • 62.67688
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
8.42e3
  • 8.42e3
62.28345
  • 62.28345
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
8.71e3
  • 8.71e3
60.99319
  • 60.99319
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
8.74e3
  • 8.74e3
60.84990
  • 60.84990
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
8.77e3
  • 8.77e3
60.72864
  • 60.72864
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
8.78e3
  • 8.78e3
60.71109
  • 60.71109
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.88e3
  • 8.88e3
  • 1.08e4
60.25882
  • 60.25882
  • 51.50913
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
8.91e3
  • 8.91e3
  • 9.70e3
60.11007
  • 60.11007
  • 56.57353
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
8.92e3
  • 8.92e3
60.08418
  • 60.08418
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
8.98e3
  • 8.98e3
59.81103
  • 59.81103
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
9.02e3
  • 9.02e3
59.62744
  • 59.62744
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
9.10e3
  • 9.10e3
  • 9.50e3
59.27503
  • 59.27503
  • 57.48254
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
9.17e3
  • 9.17e3
58.92441
  • 58.92441
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
9.51e3
  • 9.51e3
57.40843
  • 57.40843
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
55.06000
  • 55.06000
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.01e4
  • 1.01e4
  • 1.05e4
54.92817
  • 54.92817
  • 53.13725
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
53.47931
  • 53.47931
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.09e4
  • 1.09e4
51.41949
  • 51.41949
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
51.16425
  • 51.16425
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
50.04299
  • 50.04299
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.15e4
  • 1.15e4
48.31184
  • 48.31184
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
48.20491
  • 48.20491
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.17e4
  • 1.17e4
47.41076
  • 47.41076
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.25e4
  • 1.25e4
43.84292
  • 43.84292
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03006297
EnsemblENSCAFG00000004798 (TSEN54)
HGNCHGNC:27561 (TSEN54)
Uniprot/SPTREMBLE2RAR4, E2RAR4_CANLF

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