C. lupus familiaris Gene: KDM4A - ENSCAFG00000004903 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000004903
NameKDM4A
Descriptionlysine (K)-specific demethylase 4A [Source:HGNC Symbol;Acc:HGNC:22978]
OrganismCanis lupus familiaris (dog)
Synonym(s)jhdm3a, jmjd2, jmjd2a, kiaa0677, tdrd14a

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0000104life cycle
2.66e3
  • 2.66e3
88.08436
  • 88.08436
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.90e3
  • 2.90e3
  • 5.59e3
  • 6.03e3
86.99928
  • 86.99928
  • 74.99104
  • 73.02526
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
3.17e3
  • 3.17e3
85.78927
  • 85.78927
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
3.26e3
  • 3.26e3
85.42450
  • 85.42450
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.28e3
  • 3.28e3
  • 7.62e3
85.33495
  • 85.33495
  • 65.87941
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
3.46e3
  • 3.46e3
84.52445
  • 84.52445
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.48e3
  • 3.48e3
  • 6.27e3
84.40184
  • 84.40184
  • 71.91541
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.76e3
  • 3.76e3
  • 5.72e3
83.18659
  • 83.18659
  • 74.38653
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
3.95e3
  • 3.95e3
82.31985
  • 82.31985
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.39e3
  • 4.39e3
  • 5.76e3
  • 6.11e3
  • 7.93e3
80.36486
  • 80.36486
  • 74.21346
  • 72.64016
  • 64.50385
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
4.42e3
  • 4.42e3
  • 6.49e3
80.20903
  • 80.20903
  • 70.93409
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
4.50e3
  • 4.50e3
79.86298
  • 79.86298
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
4.53e3
  • 4.53e3
79.70625
  • 79.70625
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.57e3
  • 4.57e3
  • 5.25e3
79.55400
  • 79.55400
  • 76.47770
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
4.60e3
  • 4.60e3
79.40176
  • 79.40176
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
4.67e3
  • 4.67e3
79.09726
  • 79.09726
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
4.72e3
  • 4.72e3
78.88232
  • 78.88232
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
4.78e3
  • 4.78e3
78.60917
  • 78.60917
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.83e3
  • 4.83e3
  • 6.04e3
78.39423
  • 78.39423
  • 72.97152
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
5.04e3
  • 5.04e3
77.44421
  • 77.44421
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
5.05e3
  • 5.05e3
77.39119
  • 77.39119
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.18e3
  • 5.18e3
  • 6.21e3
76.79854
  • 76.79854
  • 72.18789
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.25e3
  • 5.25e3
  • 5.95e3
76.48652
  • 76.48652
  • 73.36557
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
5.30e3
  • 5.30e3
76.26276
  • 76.26276
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
5.31e3
  • 5.31e3
76.21673
  • 76.21673
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
5.40e3
  • 5.40e3
75.82393
  • 75.82393
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
5.46e3
  • 5.46e3
75.56869
  • 75.56869
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.48e3
  • 5.48e3
  • 5.83e3
75.46570
  • 75.46570
  • 73.89396
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.55e3
  • 5.55e3
  • 5.96e3
75.13922
  • 75.13922
  • 73.30736
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.61e3
  • 5.61e3
  • 6.72e3
74.89253
  • 74.89253
  • 69.90417
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
5.61e3
  • 5.61e3
74.89253
  • 74.89253
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
5.61e3
  • 5.61e3
74.88358
  • 74.88358
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.62e3
  • 5.62e3
  • 5.74e3
74.83880
  • 74.83880
  • 74.29290
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
5.84e3
  • 5.84e3
73.85814
  • 73.85814
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
5.84e3
  • 5.84e3
73.84919
  • 73.84919
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
5.97e3
  • 5.97e3
73.26258
  • 73.26258
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
6.02e3
  • 6.02e3
73.06556
  • 73.06556
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.02e3
  • 6.02e3
  • 6.15e3
73.04241
  • 73.04241
  • 72.45858
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
6.19e3
  • 6.19e3
72.30879
  • 72.30879
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
6.28e3
  • 6.28e3
71.89683
  • 71.89683
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
6.33e3
  • 6.33e3
71.66846
  • 71.66846
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
6.36e3
  • 6.36e3
71.51621
  • 71.51621
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
6.37e3
  • 6.37e3
71.47143
  • 71.47143
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
6.61e3
  • 6.61e3
70.42361
  • 70.42361
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
6.80e3
  • 6.80e3
69.54594
  • 69.54594
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.84e3
  • 6.84e3
69.38496
  • 69.38496
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
7.03e3
  • 7.03e3
68.50708
  • 68.50708
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
7.16e3
  • 7.16e3
67.95576
  • 67.95576
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
7.34e3
  • 7.34e3
67.15923
  • 67.15923
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
7.54e3
  • 7.54e3
66.25022
  • 66.25022
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
7.86e3
  • 7.86e3
64.81681
  • 64.81681
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03009806, AAEX03009807
EnsemblENSCAFG00000004903 (KDM4A)
HGNCHGNC:22978 (KDM4A)
Uniprot/SPTREMBLE2RFE0, E2RFE0_CANLF

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