C. lupus familiaris Gene: TMEM40 - ENSCAFG00000004929 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000004929
NameTMEM40
Descriptiontransmembrane protein 40 [Source:HGNC Symbol;Acc:HGNC:25620]
OrganismCanis lupus familiaris (dog)
Synonym(s)flj11036

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000004nose
  • UBERON:0000104life cycle
1.12e3
  • 1.12e3
95.00981
  • 95.00981
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
3.99e3
  • 3.99e3
82.11983
  • 82.11983
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.75e3
  • 4.75e3
  • 1.23e4
78.74257
  • 78.74257
  • 45.06538
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
5.68e3
  • 5.68e3
74.59251
  • 74.59251
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
7.06e3
  • 7.06e3
68.37274
  • 68.37274
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.07e3
  • 7.07e3
68.35483
  • 68.35483
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
7.32e3
  • 7.32e3
  • 1.39e4
67.22640
  • 67.22640
  • 37.69927
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
7.53e3
  • 7.53e3
66.27261
  • 66.27261
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
7.63e3
  • 7.63e3
65.84721
  • 65.84721
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
9.35e3
  • 9.35e3
58.14526
  • 58.14526
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
9.55e3
  • 9.55e3
57.24028
  • 57.24028
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.72e3
  • 9.72e3
  • 9.76e3
56.48845
  • 56.48845
  • 56.28511
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
9.81e3
  • 9.81e3
56.08544
  • 56.08544
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
9.90e3
  • 9.90e3
55.66452
  • 55.66452
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
55.06448
  • 55.06448
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.05e4
  • 1.05e4
52.89271
  • 52.89271
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
1.08e4
  • 1.08e4
51.80011
  • 51.80011
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
50.81278
  • 50.81278
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
  • 1.29e4
50.46122
  • 50.46122
  • 42.27897
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.11e4
  • 1.11e4
50.11642
  • 50.11642
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
49.99552
  • 49.99552
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.12e4
  • 1.12e4
49.81641
  • 49.81641
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
  • 1.46e4
47.91779
  • 47.91779
  • 34.54496
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.26e4
47.17446
  • 47.17446
  • 43.54375
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.23e4
  • 1.23e4
44.71162
  • 44.71162
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
  • 1.31e4
43.81529
  • 43.81529
  • 41.39020
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
42.20849
  • 42.20849
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
  • 1.51e4
42.17240
  • 42.17240
  • 32.24978
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
40.76214
  • 40.76214
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
  • 1.43e4
  • 1.54e4
40.53918
  • 40.53918
  • 36.17679
  • 30.87050
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
39.51728
  • 39.51728
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.37e4
  • 1.37e4
38.65753
  • 38.65753
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.39e4
  • 1.39e4
  • 1.44e4
37.82465
  • 37.82465
  • 35.60362
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
  • 1.77e4
37.50224
  • 37.50224
  • 20.85527
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.40e4
  • 1.40e4
37.36781
  • 37.36781
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.42e4
  • 1.42e4
36.47680
  • 36.47680
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
35.55606
  • 35.55606
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
34.50206
  • 34.50206
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
34.34533
  • 34.34533
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.48e4
  • 1.48e4
33.64231
  • 33.64231
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
  • 1.59e4
  • 1.60e4
33.50349
  • 33.50349
  • 28.92513
  • 28.26437
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
33.19452
  • 33.19452
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
33.13631
  • 33.13631
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
31.70339
  • 31.70339
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
  • 1.61e4
30.36450
  • 30.36450
  • 27.90614
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
29.64419
  • 29.64419
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
1.61e4
  • 1.61e4
27.99570
  • 27.99570
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
20.72895
  • 20.72895
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03012060
EnsemblENSCAFG00000004929 (TMEM40)
HGNCHGNC:25620 (TMEM40)
Uniprot/SPTREMBLE2RFC2, E2RFC2_CANLF

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