C. lupus familiaris Gene: TRIM47 - ENSCAFG00000004953 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000004953
NameTRIM47
Descriptiontripartite motif containing 47 [Source:HGNC Symbol;Acc:HGNC:19020]
OrganismCanis lupus familiaris (dog)
Synonym(s)goa, rnf100

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.28e3
  • 4.28e3
  • 1.35e4
80.85259
  • 80.85259
  • 39.36181
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
5.35e3
  • 5.35e3
76.06126
  • 76.06126
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.31e3
  • 7.31e3
  • 9.75e3
67.29357
  • 67.29357
  • 56.33172
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
9.43e3
  • 9.43e3
  • 1.13e4
57.78255
  • 57.78255
  • 49.44483
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
9.49e3
  • 9.49e3
57.49149
  • 57.49149
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
9.55e3
  • 9.55e3
57.23406
  • 57.23406
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
9.60e3
  • 9.60e3
  • 1.13e4
57.02579
  • 57.02579
  • 49.40892
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
9.96e3
  • 9.96e3
55.39137
  • 55.39137
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
  • 1.32e4
52.93749
  • 52.93749
  • 40.93834
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.06e4
  • 1.06e4
52.66434
  • 52.66434
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.09e4
  • 1.09e4
  • 1.26e4
  • 1.42e4
51.27172
  • 51.27172
  • 43.47125
  • 36.35142
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.09e4
  • 1.09e4
  • 1.21e4
51.05230
  • 51.05230
  • 45.88931
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
50.46570
  • 50.46570
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
50.42092
  • 50.42092
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
  • 1.30e4
50.02239
  • 50.02239
  • 41.93982
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
1.13e4
  • 1.13e4
49.44922
  • 49.44922
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.14e4
  • 1.14e4
  • 1.21e4
49.12910
  • 49.12910
  • 45.86938
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
  • 1.18e4
48.64441
  • 48.64441
  • 47.21476
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
48.54021
  • 48.54021
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
48.39244
  • 48.39244
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.16e4
  • 1.16e4
48.08347
  • 48.08347
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
47.97600
  • 47.97600
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.20e4
47.25058
  • 47.25058
  • 46.05499
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
46.32814
  • 46.32814
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.20e4
  • 1.20e4
46.28336
  • 46.28336
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
45.22237
  • 45.22237
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.23e4
  • 1.23e4
  • 1.45e4
44.70670
  • 44.70670
  • 35.13716
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.24e4
  • 1.24e4
44.42056
  • 44.42056
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.24e4
  • 1.24e4
44.42056
  • 44.42056
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.25e4
  • 1.25e4
44.04890
  • 44.04890
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
43.96431
  • 43.96431
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
  • 1.29e4
  • 1.34e4
  • 1.39e4
43.90525
  • 43.90525
  • 42.05194
  • 40.04567
  • 37.95898
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
1.26e4
  • 1.26e4
43.39065
  • 43.39065
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
43.21601
  • 43.21601
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.27e4
  • 1.27e4
43.08168
  • 43.08168
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
42.10402
  • 42.10402
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.30e4
  • 1.30e4
42.01146
  • 42.01146
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
41.55920
  • 41.55920
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.34e4
  • 1.34e4
  • 1.42e4
40.22470
  • 40.22470
  • 36.26634
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
40.21583
  • 40.21583
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
39.82626
  • 39.82626
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
39.05606
  • 39.05606
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
38.80942
  • 38.80942
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
38.67097
  • 38.67097
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.38e4
  • 1.38e4
38.36199
  • 38.36199
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.39e4
  • 1.39e4
37.96655
  • 37.96655
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.41e4
  • 1.41e4
37.02758
  • 37.02758
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.51e4
  • 1.51e4
32.22869
  • 32.22869
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.56e4
  • 1.56e4
  • 1.62e4
30.36383
  • 30.36383
  • 27.46731
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03006289
EnsemblENSCAFG00000004953 (TRIM47)
HGNCHGNC:19020 (TRIM47)
Uniprot/SPTREMBLF1P7Y1, F1P7Y1_CANLF

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