C. lupus familiaris Gene: XRCC2 - ENSCAFG00000004964 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000004964
NameXRCC2
DescriptionX-ray repair complementing defective repair in Chinese hamster cells 2 [Source:HGNC Symbol;Acc:HGNC:12829]
OrganismCanis lupus familiaris (dog)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
6.41e3
  • 6.41e3
71.31918
  • 71.31918
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.49e3
  • 6.49e3
  • 9.13e3
  • 1.27e4
70.92750
  • 70.92750
  • 59.12592
  • 43.06824
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
6.88e3
  • 6.88e3
69.20562
  • 69.20562
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.01e3
  • 7.01e3
  • 7.74e3
  • 1.09e4
  • 1.13e4
68.62740
  • 68.62740
  • 65.33226
  • 51.16425
  • 49.50542
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.27e3
  • 7.27e3
  • 1.29e4
67.46471
  • 67.46471
  • 42.26455
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.44e3
  • 7.44e3
  • 1.08e4
66.68458
  • 66.68458
  • 51.45119
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
7.73e3
  • 7.73e3
  • 1.28e4
65.39172
  • 65.39172
  • 42.82644
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
7.98e3
  • 7.98e3
  • 9.53e3
64.27548
  • 64.27548
  • 57.32093
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
8.19e3
  • 8.19e3
63.31994
  • 63.31994
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
8.19e3
  • 8.19e3
63.31274
  • 63.31274
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
8.28e3
  • 8.28e3
62.94107
  • 62.94107
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
8.37e3
  • 8.37e3
62.51567
  • 62.51567
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.38e3
  • 8.38e3
  • 1.05e4
62.49776
  • 62.49776
  • 52.80315
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.42e3
  • 8.42e3
  • 1.07e4
62.30969
  • 62.30969
  • 52.29276
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
8.42e3
  • 8.42e3
62.30073
  • 62.30073
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
8.50e3
  • 8.50e3
61.96042
  • 61.96042
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
8.60e3
  • 8.60e3
61.49919
  • 61.49919
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.63e3
  • 8.63e3
  • 1.01e4
61.37829
  • 61.37829
  • 54.86745
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
8.95e3
  • 8.95e3
59.92746
  • 59.92746
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
9.29e3
  • 9.29e3
58.39602
  • 58.39602
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
9.57e3
  • 9.57e3
57.16013
  • 57.16013
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
9.76e3
  • 9.76e3
56.31829
  • 56.31829
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
9.84e3
  • 9.84e3
  • 1.01e4
55.94215
  • 55.94215
  • 54.68386
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
9.85e3
  • 9.85e3
55.90184
  • 55.90184
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
9.89e3
  • 9.89e3
55.72721
  • 55.72721
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
  • 1.12e4
55.08239
  • 55.08239
  • 49.73581
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
55.00219
  • 55.00219
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
54.96149
  • 54.96149
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
1.01e4
  • 1.01e4
54.85402
  • 54.85402
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
54.71968
  • 54.71968
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.02e4
  • 1.02e4
54.41967
  • 54.41967
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.02e4
  • 1.02e4
54.26294
  • 54.26294
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
  • 1.18e4
54.20473
  • 54.20473
  • 47.17459
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.04e4
  • 1.04e4
53.63604
  • 53.63604
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
1.07e4
  • 1.07e4
52.13147
  • 52.13147
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.10e4
  • 1.10e4
  • 1.11e4
50.70518
  • 50.70518
  • 50.35765
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
50.22389
  • 50.22389
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
50.10210
  • 50.10210
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
49.57908
  • 49.57908
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
48.72268
  • 48.72268
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
48.05718
  • 48.05718
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
47.45656
  • 47.45656
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
47.13864
  • 47.13864
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.18e4
  • 1.18e4
  • 1.22e4
47.09274
  • 47.09274
  • 45.26240
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
46.51621
  • 46.51621
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
45.84005
  • 45.84005
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
44.12054
  • 44.12054
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
43.78918
  • 43.78918
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.27e4
  • 1.27e4
43.11634
  • 43.11634
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
35.88940
  • 35.88940
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03010293, AAEX03010294
EnsemblENSCAFG00000004964 (XRCC2)
HGNCHGNC:12829 (XRCC2)
Uniprot/SPTREMBLE2REH7, E2REH7_CANLF

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