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C. lupus familiaris Gene: LYPD1 - ENSCAFG00000005000 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000005000
NameLYPD1
DescriptionLY6/PLAUR domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28431]
OrganismCanis lupus familiaris (dog)
Synonym(s)lypdc1, mgc29643
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
432
  • 432
  • 1.77e4
98.07
  • 98.07
  • 20.87
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.03e3
  • 1.03e3
95.39
  • 95.39
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
1.14e3
  • 1.14e3
  • 1.46e3
  • 8.70e3
94.92
  • 94.92
  • 93.49
  • 61.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
1.40e3
  • 1.40e3
93.72
  • 93.72
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.51e3
  • 1.51e3
  • 3.07e3
  • 7.26e3
93.25
  • 93.25
  • 86.28
  • 67.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.26e3
  • 2.26e3
  • 2.65e3
89.88
  • 89.88
  • 88.15
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
2.30e3
  • 2.30e3
89.70
  • 89.70
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.05e3
  • 3.05e3
86.35
  • 86.35
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
3.59e3
  • 3.59e3
83.93
  • 83.93
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
4.19e3
  • 4.19e3
  • 1.37e4
81.27
  • 81.27
  • 38.52
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
4.50e3
  • 4.50e3
79.89
  • 79.89
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
4.87e3
  • 4.87e3
78.23
  • 78.23
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
5.31e3
  • 5.31e3
76.25
  • 76.25
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
5.54e3
  • 5.54e3
75.25
  • 75.25
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
6.14e3
  • 6.14e3
72.55
  • 72.55
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
6.16e3
  • 6.16e3
72.45
  • 72.45
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.96e3
  • 6.96e3
  • 7.13e3
68.89
  • 68.89
  • 68.11
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.31e3
  • 7.31e3
  • 1.38e4
67.33
  • 67.33
  • 38.16
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
7.73e3
  • 7.73e3
65.45
  • 65.45
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
7.81e3
  • 7.81e3
65.09
  • 65.09
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
7.83e3
  • 7.83e3
64.98
  • 64.98
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
8.05e3
  • 8.05e3
64.02
  • 64.02
AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
8.17e3
  • 8.17e3
63.47
  • 63.47
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.64e3
  • 8.64e3
  • 1.07e4
  • 1.12e4
61.35
  • 61.35
  • 52.17
  • 50.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.81e3
  • 8.81e3
60.59
  • 60.59
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
8.90e3
  • 8.90e3
60.21
  • 60.21
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
9.06e3
  • 9.06e3
59.48
  • 59.48
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
9.20e3
  • 9.20e3
58.85
  • 58.85
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
9.55e3
  • 9.55e3
  • 2.08e4
57.31
  • 57.31
  • 7.15
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
9.62e3
  • 9.62e3
  • 1.00e4
56.98
  • 56.98
  • 55.28
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
9.91e3
  • 9.91e3
55.70
  • 55.70
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
54.20
  • 54.20
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.06e4
  • 1.06e4
52.78
  • 52.78
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.06e4
  • 1.06e4
  • 1.36e4
52.75
  • 52.75
  • 38.97
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
51.76
  • 51.76
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.12e4
  • 1.12e4
49.71
  • 49.71
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.15e4
  • 1.15e4
  • 1.31e4
48.39
  • 48.39
  • 41.47
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.17e4
  • 1.17e4
  • 1.42e4
47.71
  • 47.71
  • 36.39
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.18e4
  • 1.18e4
47.09
  • 47.09
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
  • 1.51e4
45.13
  • 45.13
  • 32.31
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
44.04
  • 44.04
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
  • 1.54e4
  • 1.73e4
  • 2.08e4
  • 2.08e4
41.94
  • 41.94
  • 31.08
  • 22.62
  • 7.17
  • 7.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.33e4
  • 1.33e4
40.56
  • 40.56
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
  • 1.45e4
39.88
  • 39.88
  • 35.01
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
37.92
  • 37.92
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
37.29
  • 37.29
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.48e4
  • 1.48e4
33.84
  • 33.84
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
  • 1.97e4
32.44
  • 32.44
  • 12.03
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
32.29
  • 32.29
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
32.27
  • 32.27
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
30.19
  • 30.19
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000005000.

Cross-references

EnsemblENSCAFG00000005000 (LYPD1)
HGNCHGNC:28431 (LYPD1)
EMBLAAEX03011899
Uniprot/SPTREMBLF1P667, F1P667_CANLF

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