C. lupus familiaris Gene: PTPRF - ENSCAFG00000005069 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000005069
NamePTPRF
Descriptionprotein tyrosine phosphatase, receptor type, F [Source:HGNC Symbol;Acc:HGNC:9670]
OrganismCanis lupus familiaris (dog)
Synonym(s)lar

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
331
  • 331
98.52320
  • 98.52320
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
656
  • 656
  • 6.65e3
97.06699
  • 97.06699
  • 70.22098
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.37e3
  • 1.37e3
93.86083
  • 93.86083
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.44e3
  • 1.44e3
93.57800
  • 93.57800
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.63e3
  • 1.63e3
92.72792
  • 92.72792
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
1.90e3
  • 1.90e3
  • 3.59e3
  • 6.77e3
91.50546
  • 91.50546
  • 83.92182
  • 69.70267
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
2.12e3
  • 2.12e3
90.50242
  • 90.50242
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.13e3
  • 2.13e3
  • 1.04e4
90.46212
  • 90.46212
  • 53.46333
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.19e3
  • 2.19e3
  • 1.29e4
90.19792
  • 90.19792
  • 42.33835
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
2.30e3
  • 2.30e3
  • 2.58e3
  • 4.63e3
  • 4.98e3
89.72242
  • 89.72242
  • 88.44259
  • 79.27190
  • 77.69962
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
2.37e3
  • 2.37e3
89.37847
  • 89.37847
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.39e3
  • 2.39e3
89.29787
  • 89.29787
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
3.00e3
  • 3.00e3
86.56636
  • 86.56636
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.12e3
  • 3.12e3
  • 5.56e3
86.05244
  • 86.05244
  • 75.10747
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.30e3
  • 3.30e3
  • 3.45e3
85.22125
  • 85.22125
  • 84.55947
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.55e3
  • 3.55e3
  • 4.36e3
84.10801
  • 84.10801
  • 80.50331
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
4.22e3
  • 4.22e3
81.09439
  • 81.09439
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.55e3
  • 4.55e3
  • 7.26e3
79.62234
  • 79.62234
  • 67.50403
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
5.33e3
  • 5.33e3
76.13290
  • 76.13290
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
5.60e3
  • 5.60e3
74.94627
  • 74.94627
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
5.66e3
  • 5.66e3
74.65064
  • 74.65064
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
5.98e3
  • 5.98e3
73.24019
  • 73.24019
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.40e3
  • 6.40e3
71.34480
  • 71.34480
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
6.57e3
  • 6.57e3
70.56690
  • 70.56690
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
6.60e3
  • 6.60e3
70.45495
  • 70.45495
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
7.54e3
  • 7.54e3
66.22336
  • 66.22336
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
7.68e3
  • 7.68e3
65.62780
  • 65.62780
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
7.71e3
  • 7.71e3
  • 8.93e3
65.47716
  • 65.47716
  • 60.01702
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
7.87e3
  • 7.87e3
64.76921
  • 64.76921
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
8.38e3
  • 8.38e3
62.50224
  • 62.50224
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
8.38e3
  • 8.38e3
62.49328
  • 62.49328
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
8.43e3
  • 8.43e3
62.23804
  • 62.23804
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
8.43e3
  • 8.43e3
  • 9.83e3
62.23486
  • 62.23486
  • 56.00036
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
8.70e3
  • 8.70e3
61.03291
  • 61.03291
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.73e3
  • 8.73e3
  • 9.72e3
60.90171
  • 60.90171
  • 56.48357
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
9.12e3
  • 9.12e3
59.17517
  • 59.17517
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
9.27e3
  • 9.27e3
  • 9.43e3
58.47663
  • 58.47663
  • 57.77360
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.01e4
  • 1.01e4
  • 1.08e4
54.97703
  • 54.97703
  • 51.43740
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.02e4
  • 1.02e4
54.40623
  • 54.40623
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
54.29429
  • 54.29429
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.06e4
  • 1.06e4
52.54791
  • 52.54791
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
  • 1.26e4
49.08651
  • 49.08651
  • 43.37162
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.14e4
  • 1.14e4
48.84023
  • 48.84023
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
1.16e4
  • 1.16e4
48.08795
  • 48.08795
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
45.68332
  • 45.68332
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
45.64750
  • 45.64750
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.22e4
  • 1.22e4
  • 1.28e4
45.32062
  • 45.32062
  • 42.66076
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
1.33e4
  • 1.33e4
40.58302
  • 40.58302
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.39e4
  • 1.39e4
37.81121
  • 37.81121
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03009807
EnsemblENSCAFG00000005069 (PTPRF)
HGNCHGNC:9670 (PTPRF)
Uniprot/SPTREMBLE2RE80, E2RE80_CANLF, E2RE81, E2RE81_CANLF

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