C. lupus familiaris Gene: TTC21A - ENSCAFG00000005087 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000005087
NameTTC21A
Descriptiontetratricopeptide repeat domain 21A [Source:HGNC Symbol;Acc:HGNC:30761]
OrganismCanis lupus familiaris (dog)
Synonym(s)ift139a, sti2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000104life cycle
3.53e3
  • 3.53e3
84.21548
  • 84.21548
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
3.72e3
  • 3.72e3
83.35021
  • 83.35021
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
4.06e3
  • 4.06e3
  • 1.09e4
  • 1.10e4
81.81981
  • 81.81981
  • 51.28515
  • 50.61629
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.02e3
  • 6.02e3
  • 8.67e3
73.06757
  • 73.06757
  • 61.16783
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
6.29e3
  • 6.29e3
71.84439
  • 71.84439
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
7.13e3
  • 7.13e3
68.05642
  • 68.05642
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
7.40e3
  • 7.40e3
66.87713
  • 66.87713
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.30e3
  • 8.30e3
  • 8.43e3
62.85599
  • 62.85599
  • 62.27834
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
8.57e3
  • 8.57e3
61.63801
  • 61.63801
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
8.61e3
  • 8.61e3
  • 1.25e4
61.44546
  • 61.44546
  • 44.04890
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
8.91e3
  • 8.91e3
60.10210
  • 60.10210
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
9.19e3
  • 9.19e3
  • 1.22e4
58.86136
  • 58.86136
  • 45.46839
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
9.25e3
  • 9.25e3
58.57066
  • 58.57066
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.29e3
  • 9.29e3
  • 1.04e4
58.40977
  • 58.40977
  • 53.52311
AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
9.43e3
  • 9.43e3
57.79473
  • 57.79473
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
9.50e3
  • 9.50e3
57.45119
  • 57.45119
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
9.91e3
  • 9.91e3
55.61974
  • 55.61974
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
55.15404
  • 55.15404
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.03e4
  • 1.03e4
  • 1.05e4
53.70768
  • 53.70768
  • 53.06287
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
  • 1.12e4
51.90310
  • 51.90310
  • 49.79733
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.08e4
  • 1.08e4
51.78220
  • 51.78220
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.08e4
  • 1.08e4
51.76428
  • 51.76428
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.08e4
  • 1.08e4
  • 1.25e4
51.72004
  • 51.72004
  • 43.95039
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
51.69712
  • 51.69712
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
51.34784
  • 51.34784
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
  • 1.16e4
  • 1.26e4
  • 1.28e4
51.14356
  • 51.14356
  • 47.90883
  • 43.58320
  • 42.60277
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.10e4
  • 1.10e4
50.61092
  • 50.61092
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
50.50730
  • 50.50730
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
49.88416
  • 49.88416
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
49.38452
  • 49.38452
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
48.65664
  • 48.65664
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.15e4
  • 1.15e4
  • 1.21e4
48.52678
  • 48.52678
  • 45.63590
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.17e4
  • 1.17e4
47.76106
  • 47.76106
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
47.42970
  • 47.42970
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.19e4
  • 1.19e4
46.93400
  • 46.93400
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
46.74458
  • 46.74458
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.20e4
  • 1.20e4
46.19828
  • 46.19828
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
45.91170
  • 45.91170
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
45.77736
  • 45.77736
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.22e4
  • 1.22e4
  • 1.24e4
45.52539
  • 45.52539
  • 44.65856
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.22e4
  • 1.22e4
  • 1.28e4
45.50887
  • 45.50887
  • 42.63837
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.22e4
  • 1.22e4
  • 1.31e4
45.41913
  • 45.41913
  • 41.34874
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.23e4
  • 1.23e4
44.88178
  • 44.88178
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
1.24e4
  • 1.24e4
44.54147
  • 44.54147
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
44.39370
  • 44.39370
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.24e4
  • 1.24e4
44.33100
  • 44.33100
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
44.14741
  • 44.14741
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
42.15028
  • 42.15028
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.31e4
  • 1.31e4
41.28157
  • 41.28157
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
1.35e4
  • 1.35e4
39.75013
  • 39.75013
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
1.43e4
  • 1.43e4
36.06484
  • 36.06484
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03013495, AAEX03013496, AAEX03013497
EnsemblENSCAFG00000005087 (TTC21A)
HGNCHGNC:30761 (TTC21A)
Uniprot/SPTREMBLF1PG19, F1PG19_CANLF

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