C. lupus familiaris Gene: XRN2 - ENSCAFG00000005185 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000005185
NameXRN2
Description5'-3' exoribonuclease 2 [Source:HGNC Symbol;Acc:HGNC:12836]
OrganismCanis lupus familiaris (dog)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.99e3
  • 1.99e3
  • 5.32e3
  • 5.40e3
91.09892
  • 91.09892
  • 76.18216
  • 75.81497
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
2.05e3
  • 2.05e3
90.83378
  • 90.83378
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
2.20e3
  • 2.20e3
  • 4.91e3
90.14835
  • 90.14835
  • 78.01706
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
2.23e3
  • 2.23e3
90.02803
  • 90.02803
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.35e3
  • 2.35e3
  • 3.98e3
89.48375
  • 89.48375
  • 82.20491
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
2.60e3
  • 2.60e3
88.38438
  • 88.38438
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.87e3
  • 2.87e3
  • 4.36e3
87.14956
  • 87.14956
  • 80.47645
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
3.05e3
  • 3.05e3
  • 5.86e3
86.36848
  • 86.36848
  • 73.78202
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
3.17e3
  • 3.17e3
85.80064
  • 85.80064
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
3.32e3
  • 3.32e3
85.15073
  • 85.15073
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
3.40e3
  • 3.40e3
84.76625
  • 84.76625
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
3.49e3
  • 3.49e3
84.39907
  • 84.39907
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
3.50e3
  • 3.50e3
84.31847
  • 84.31847
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.52e3
  • 3.52e3
  • 4.24e3
  • 5.09e3
  • 5.84e3
84.25873
  • 84.25873
  • 81.01066
  • 77.20759
  • 73.87605
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
3.64e3
  • 3.64e3
83.69076
  • 83.69076
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.71e3
  • 3.71e3
  • 4.65e3
83.41394
  • 83.41394
  • 79.18682
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
3.81e3
  • 3.81e3
82.93928
  • 82.93928
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.84e3
  • 3.84e3
  • 7.43e3
82.79151
  • 82.79151
  • 66.73625
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.85e3
  • 3.85e3
  • 4.70e3
82.76173
  • 82.76173
  • 78.94053
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
3.95e3
  • 3.95e3
82.33029
  • 82.33029
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
3.96e3
  • 3.96e3
82.28103
  • 82.28103
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
3.98e3
  • 3.98e3
82.20043
  • 82.20043
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
4.00e3
  • 4.00e3
82.11535
  • 82.11535
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.02e3
  • 4.02e3
  • 4.11e3
82.02579
  • 82.02579
  • 81.60039
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.13e3
  • 4.13e3
  • 4.44e3
81.52427
  • 81.52427
  • 80.13613
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
4.13e3
  • 4.13e3
81.51531
  • 81.51531
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.15e3
  • 4.15e3
  • 4.37e3
81.42128
  • 81.42128
  • 80.44210
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
4.18e3
  • 4.18e3
81.30485
  • 81.30485
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.22e3
  • 4.22e3
  • 5.32e3
81.10335
  • 81.10335
  • 76.16873
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
4.31e3
  • 4.31e3
80.68691
  • 80.68691
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.37e3
  • 4.37e3
  • 4.52e3
80.44958
  • 80.44958
  • 79.74915
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
4.54e3
  • 4.54e3
79.66147
  • 79.66147
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
4.65e3
  • 4.65e3
79.20025
  • 79.20025
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
4.65e3
  • 4.65e3
79.18682
  • 79.18682
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.71e3
  • 4.71e3
  • 5.20e3
78.90243
  • 78.90243
  • 76.73388
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
4.75e3
  • 4.75e3
78.74351
  • 78.74351
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
4.79e3
  • 4.79e3
78.54648
  • 78.54648
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
5.06e3
  • 5.06e3
77.33938
  • 77.33938
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
5.08e3
  • 5.08e3
77.23894
  • 77.23894
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
5.09e3
  • 5.09e3
77.22103
  • 77.22103
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
5.11e3
  • 5.11e3
77.13595
  • 77.13595
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
5.13e3
  • 5.13e3
77.03296
  • 77.03296
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.17e3
  • 5.17e3
  • 5.71e3
76.85017
  • 76.85017
  • 74.44922
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
5.24e3
  • 5.24e3
76.55830
  • 76.55830
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
5.68e3
  • 5.68e3
74.57460
  • 74.57460
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
5.90e3
  • 5.90e3
73.60738
  • 73.60738
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
6.30e3
  • 6.30e3
71.79809
  • 71.79809
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.45e3
  • 6.45e3
71.12166
  • 71.12166
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
6.81e3
  • 6.81e3
69.52355
  • 69.52355
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
6.85e3
  • 6.85e3
69.33029
  • 69.33029
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
6.93e3
  • 6.93e3
68.99069
  • 68.99069
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
7.56e3
  • 7.56e3
66.15619
  • 66.15619
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03013750
EnsemblENSCAFG00000005185 (XRN2)
HGNCHGNC:12836 (XRN2)
Uniprot/SPTREMBLE2RMS9, E2RMS9_CANLF, F1PB11, F1PB11_CANLF

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