C. lupus familiaris Gene: CSGALNACT1 - ENSCAFG00000005337 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000005337
NameCSGALNACT1
Descriptionchondroitin sulfate N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24290]
OrganismCanis lupus familiaris (dog)
Synonym(s)chgn, csgalnact-1, flj11264

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
2.17e3
  • 2.17e3
90.27852
  • 90.27852
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
2.61e3
  • 2.61e3
88.31274
  • 88.31274
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.75e3
  • 2.75e3
  • 9.14e3
87.71270
  • 87.71270
  • 59.07903
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.85e3
  • 2.85e3
  • 9.17e3
87.24700
  • 87.24700
  • 58.92146
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
2.93e3
  • 2.93e3
86.87534
  • 86.87534
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
4.30e3
  • 4.30e3
80.77199
  • 80.77199
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
4.36e3
  • 4.36e3
  • 7.59e3
  • 1.10e4
80.49436
  • 80.49436
  • 66.03976
  • 50.55181
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
4.66e3
  • 4.66e3
79.14652
  • 79.14652
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.90e3
  • 4.90e3
  • 7.85e3
78.06287
  • 78.06287
  • 64.86992
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
5.08e3
  • 5.08e3
77.27028
  • 77.27028
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.23e3
  • 5.23e3
  • 7.63e3
76.60756
  • 76.60756
  • 65.82483
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
5.34e3
  • 5.34e3
  • 9.27e3
76.10156
  • 76.10156
  • 58.50349
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
5.94e3
  • 5.94e3
73.42513
  • 73.42513
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
6.38e3
  • 6.38e3
71.43561
  • 71.43561
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.76e3
  • 6.76e3
69.73957
  • 69.73957
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
6.92e3
  • 6.92e3
69.00412
  • 69.00412
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
7.27e3
  • 7.27e3
67.43238
  • 67.43238
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
7.52e3
  • 7.52e3
66.31739
  • 66.31739
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
7.54e3
  • 7.54e3
66.24575
  • 66.24575
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
7.56e3
  • 7.56e3
66.14723
  • 66.14723
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
7.82e3
  • 7.82e3
64.99642
  • 64.99642
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
7.88e3
  • 7.88e3
64.73222
  • 64.73222
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.07e3
  • 8.07e3
  • 8.50e3
63.89038
  • 63.89038
  • 61.93373
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.51e3
  • 8.51e3
  • 8.93e3
61.89898
  • 61.89898
  • 60.00004
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
8.62e3
  • 8.62e3
61.40704
  • 61.40704
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
8.83e3
  • 8.83e3
60.46928
  • 60.46928
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
8.87e3
  • 8.87e3
60.27226
  • 60.27226
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
8.89e3
  • 8.89e3
60.20509
  • 60.20509
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
9.22e3
  • 9.22e3
58.74082
  • 58.74082
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
9.35e3
  • 9.35e3
58.11840
  • 58.11840
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
9.92e3
  • 9.92e3
55.59287
  • 55.59287
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
9.92e3
  • 9.92e3
  • 1.14e4
55.56780
  • 55.56780
  • 48.87605
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
9.97e3
  • 9.97e3
55.34211
  • 55.34211
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
53.28229
  • 53.28229
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.06e4
  • 1.06e4
52.63747
  • 52.63747
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
52.05535
  • 52.05535
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
1.07e4
  • 1.07e4
51.90310
  • 51.90310
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
51.75533
  • 51.75533
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
  • 1.14e4
50.92414
  • 50.92414
  • 49.01621
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
  • 1.25e4
50.90453
  • 50.90453
  • 43.83092
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
  • 1.16e4
  • 1.20e4
  • 1.48e4
50.45083
  • 50.45083
  • 47.96359
  • 46.37292
  • 33.81247
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.11e4
  • 1.11e4
50.25076
  • 50.25076
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.16e4
  • 1.16e4
48.25363
  • 48.25363
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.16e4
  • 1.16e4
  • 1.28e4
48.04317
  • 48.04317
  • 42.75031
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.16e4
  • 1.16e4
47.87928
  • 47.87928
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.17e4
  • 1.17e4
  • 1.21e4
47.64464
  • 47.64464
  • 46.01469
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
46.81999
  • 46.81999
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
  • 1.46e4
43.51155
  • 43.51155
  • 34.82111
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
41.86445
  • 41.86445
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
41.42603
  • 41.42603
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
39.22174
  • 39.22174
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03010366
EnsemblENSCAFG00000005337 (CSGALNACT1)
HGNCHGNC:24290 (CSGALNACT1)
Uniprot/SPTREMBLE2QVT0, E2QVT0_CANLF

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