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C. lupus familiaris Gene: SERTAD3 - ENSCAFG00000005340 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000005340
NameSERTAD3
DescriptionSERTA domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17931]
OrganismCanis lupus familiaris (dog)
Synonym(s)rbt1
Orthologs(s)11 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.30e3
  • 2.30e3
  • 2.53e3
  • 3.82e3
89.72
  • 89.72
  • 88.69
  • 82.94
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
2.43e3
  • 2.43e3
89.14
  • 89.14
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
2.47e3
  • 2.47e3
88.96
  • 88.96
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.83e3
  • 2.83e3
  • 4.98e3
87.34
  • 87.34
  • 77.73
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.01e3
  • 3.01e3
  • 4.81e3
86.54
  • 86.54
  • 78.50
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
3.02e3
  • 3.02e3
86.50
  • 86.50
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
3.04e3
  • 3.04e3
86.43
  • 86.43
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
3.08e3
  • 3.08e3
  • 4.38e3
  • 4.76e3
86.23
  • 86.23
  • 80.44
  • 78.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
3.19e3
  • 3.19e3
  • 3.62e3
  • 4.39e3
  • 5.31e3
  • 5.82e3
85.72
  • 85.72
  • 83.84
  • 80.39
  • 76.24
  • 74.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
3.33e3
  • 3.33e3
85.09
  • 85.09
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.36e3
  • 3.36e3
  • 4.71e3
84.99
  • 84.99
  • 78.93
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.46e3
  • 3.46e3
  • 7.07e3
84.54
  • 84.54
  • 68.38
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
3.67e3
  • 3.67e3
83.61
  • 83.61
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
3.68e3
  • 3.68e3
83.57
  • 83.57
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.73e3
  • 3.73e3
  • 8.59e3
83.34
  • 83.34
  • 61.60
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
3.74e3
  • 3.74e3
  • 3.89e3
83.26
  • 83.26
  • 82.63
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
3.86e3
  • 3.86e3
82.74
  • 82.74
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.03e3
  • 4.03e3
  • 4.49e3
82.00
  • 82.00
  • 79.90
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
4.05e3
  • 4.05e3
  • 5.83e3
81.91
  • 81.91
  • 73.91
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
4.11e3
  • 4.11e3
81.62
  • 81.62
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
4.19e3
  • 4.19e3
  • 4.84e3
81.28
  • 81.28
  • 78.36
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
4.21e3
  • 4.21e3
81.16
  • 81.16
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
4.22e3
  • 4.22e3
81.14
  • 81.14
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
4.27e3
  • 4.27e3
80.93
  • 80.93
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
4.35e3
  • 4.35e3
80.57
  • 80.57
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
4.41e3
  • 4.41e3
  • 5.01e3
80.26
  • 80.26
  • 77.58
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
4.46e3
  • 4.46e3
80.05
  • 80.05
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.48e3
  • 4.48e3
  • 4.66e3
79.98
  • 79.98
  • 79.19
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
4.48e3
  • 4.48e3
79.97
  • 79.97
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
4.54e3
  • 4.54e3
  • 5.31e3
  • 6.55e3
79.72
  • 79.72
  • 76.27
  • 70.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
4.56e3
  • 4.56e3
79.62
  • 79.62
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
4.72e3
  • 4.72e3
78.91
  • 78.91
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
4.81e3
  • 4.81e3
78.51
  • 78.51
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
4.97e3
  • 4.97e3
77.80
  • 77.80
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
4.98e3
  • 4.98e3
77.76
  • 77.76
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.05e3
  • 5.05e3
  • 6.15e3
77.41
  • 77.41
  • 72.50
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
5.14e3
  • 5.14e3
77.03
  • 77.03
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
5.19e3
  • 5.19e3
76.82
  • 76.82
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
5.36e3
  • 5.36e3
76.04
  • 76.04
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
5.51e3
  • 5.51e3
75.35
  • 75.35
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.81e3
  • 5.81e3
  • 5.97e3
74.04
  • 74.04
  • 73.29
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
5.85e3
  • 5.85e3
73.85
  • 73.85
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
6.05e3
  • 6.05e3
72.96
  • 72.96
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
6.22e3
  • 6.22e3
72.20
  • 72.20
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
6.66e3
  • 6.66e3
70.23
  • 70.23
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
6.66e3
  • 6.66e3
70.22
  • 70.22
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
6.94e3
  • 6.94e3
68.96
  • 68.96
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
7.25e3
  • 7.25e3
67.57
  • 67.57
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.35e3
  • 7.35e3
  • 8.41e3
67.12
  • 67.12
  • 62.38
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
8.07e3
  • 8.07e3
63.94
  • 63.94
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
8.14e3
  • 8.14e3
63.60
  • 63.60
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
8.50e3
  • 8.50e3
61.99
  • 61.99
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
8.62e3
  • 8.62e3
61.47
  • 61.47
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.43e3
  • 9.43e3
57.82
  • 57.82
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
9.85e3
  • 9.85e3
55.94
  • 55.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Euteleostomi11 species11 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000005340.

Cross-references

EnsemblENSCAFG00000005340 (SERTAD3)
HGNCHGNC:17931 (SERTAD3)
EMBLAAEX03000944
Uniprot/SPTREMBLF6Y1I1, F6Y1I1_CANLF

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