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C. lupus familiaris Gene: LAMP5 - ENSCAFG00000005690 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000005690
NameLAMP5
Descriptionlysosomal associated membrane protein family member 5 [Source:HGNC Symbol;Acc:HGNC:16097]
OrganismCanis lupus familiaris (dog)
Synonym(s)bad-lamp, c20orf103, c24h20orf103, dj1119d9.3, unc-43
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
172
  • 172
99.24
  • 99.24
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
272
  • 272
98.79
  • 98.79
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
283
  • 283
98.74
  • 98.74
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
301
  • 301
98.66
  • 98.66
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
843
  • 843
96.23
  • 96.23
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.43e3
  • 1.43e3
  • 4.76e3
93.63
  • 93.63
  • 78.74
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
3.39e3
  • 3.39e3
84.84
  • 84.84
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
5.88e3
  • 5.88e3
73.73
  • 73.73
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.60e3
  • 6.60e3
  • 2.00e4
70.50
  • 70.50
  • 10.61
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
9.30e3
  • 9.30e3
58.41
  • 58.41
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
9.66e3
  • 9.66e3
56.80
  • 56.80
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
  • 1.82e4
49.80
  • 49.80
  • 18.69
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.31e4
  • 1.31e4
  • 1.51e4
  • 1.74e4
41.59
  • 41.59
  • 32.28
  • 22.34
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
38.61
  • 38.61
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
  • 1.80e4
35.14
  • 35.14
  • 19.66
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
  • 1.82e4
34.92
  • 34.92
  • 18.64
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
  • 1.65e4
34.80
  • 34.80
  • 26.38
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.49e4
  • 1.49e4
33.57
  • 33.57
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
  • 2.11e4
31.55
  • 31.55
  • 5.57
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.53e4
  • 1.53e4
31.54
  • 31.54
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.54e4
  • 1.54e4
  • 1.59e4
31.18
  • 31.18
  • 28.70
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.55e4
  • 1.55e4
30.84
  • 30.84
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
30.51
  • 30.51
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.59e4
  • 1.59e4
29.08
  • 29.08
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.59e4
  • 1.59e4
28.82
  • 28.82
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.92e4
  • 1.92e4
14.04
  • 14.04
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.95e4
  • 1.95e4
12.83
  • 12.83
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000005690.

Cross-references

EnsemblENSCAFG00000005690 (LAMP5)
HGNCHGNC:16097 (LAMP5)
EMBLAAEX03013796
Uniprot/SPTREMBLE2R467, E2R467_CANLF

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