C. lupus familiaris Gene: CHMP6 - ENSCAFG00000005697 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000005697
NameCHMP6
Descriptioncharged multivesicular body protein 6 [Source:HGNC Symbol;Acc:HGNC:25675]
OrganismCanis lupus familiaris (dog)
Synonym(s)flj11749, vps20

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.03e3
  • 1.03e3
95.41465
  • 95.41465
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.03e3
  • 1.03e3
95.41465
  • 95.41465
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.05e3
  • 1.05e3
95.30270
  • 95.30270
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.17e3
  • 1.17e3
94.78636
  • 94.78636
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
1.22e3
  • 1.22e3
94.53251
  • 94.53251
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.23e3
  • 1.23e3
  • 3.54e3
94.51316
  • 94.51316
  • 84.16228
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.28e3
  • 1.28e3
94.25488
  • 94.25488
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.32e3
  • 1.32e3
94.11607
  • 94.11607
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.37e3
  • 1.37e3
  • 1.54e3
93.86978
  • 93.86978
  • 93.11772
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.37e3
  • 1.37e3
  • 1.59e3
  • 2.18e3
93.86016
  • 93.86016
  • 92.86674
  • 90.22927
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.45e3
  • 1.45e3
93.52499
  • 93.52499
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.45e3
  • 1.45e3
  • 2.04e3
93.50708
  • 93.50708
  • 90.86799
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.46e3
  • 1.46e3
93.48478
  • 93.48478
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.54e3
  • 1.54e3
93.10407
  • 93.10407
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.56e3
  • 1.56e3
93.01899
  • 93.01899
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.57e3
  • 1.57e3
92.96973
  • 92.96973
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.58e3
  • 1.58e3
92.94734
  • 92.94734
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.61e3
  • 1.61e3
  • 1.79e3
92.79957
  • 92.79957
  • 91.99355
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.67e3
  • 1.67e3
92.52194
  • 92.52194
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.68e3
  • 1.68e3
92.46373
  • 92.46373
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.69e3
  • 1.69e3
  • 4.27e3
92.44134
  • 92.44134
  • 80.87265
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.70e3
  • 1.70e3
92.41447
  • 92.41447
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.70e3
  • 1.70e3
92.39656
  • 92.39656
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.70e3
  • 1.70e3
  • 1.85e3
92.38761
  • 92.38761
  • 91.71145
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.71e3
  • 1.71e3
  • 3.44e3
92.36969
  • 92.36969
  • 84.59193
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.74e3
  • 1.74e3
  • 1.93e3
92.21745
  • 92.21745
  • 91.37560
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.78e3
  • 1.78e3
92.03833
  • 92.03833
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.80e3
  • 1.80e3
91.95325
  • 91.95325
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.83e3
  • 1.83e3
91.79205
  • 91.79205
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.90e3
  • 1.90e3
  • 2.00e3
91.49987
  • 91.49987
  • 91.07008
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.91e3
  • 1.91e3
91.44403
  • 91.44403
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.92e3
  • 1.92e3
  • 2.34e3
91.38904
  • 91.38904
  • 89.53685
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.93e3
  • 1.93e3
91.38008
  • 91.38008
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
1.94e3
  • 1.94e3
91.31291
  • 91.31291
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.97e3
  • 1.97e3
91.18306
  • 91.18306
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.99e3
  • 1.99e3
91.09798
  • 91.09798
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
2.01e3
  • 2.01e3
91.02185
  • 91.02185
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
2.01e3
  • 2.01e3
  • 2.19e3
  • 2.36e3
  • 4.43e3
91.01290
  • 91.01290
  • 90.20688
  • 89.43216
  • 80.14670
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
2.02e3
  • 2.02e3
90.96364
  • 90.96364
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
2.04e3
  • 2.04e3
90.86960
  • 90.86960
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
2.06e3
  • 2.06e3
90.79317
  • 90.79317
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
2.06e3
  • 2.06e3
90.76988
  • 90.76988
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
2.07e3
  • 2.07e3
90.73975
  • 90.73975
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
2.08e3
  • 2.08e3
90.70392
  • 90.70392
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.17e3
  • 2.17e3
  • 2.42e3
90.29196
  • 90.29196
  • 89.18780
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
2.26e3
  • 2.26e3
89.90050
  • 89.90050
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
2.33e3
  • 2.33e3
89.58445
  • 89.58445
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.37e3
  • 2.37e3
89.40422
  • 89.40422
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.39e3
  • 2.39e3
  • 2.58e3
89.32474
  • 89.32474
  • 88.44707
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
2.49e3
  • 2.49e3
88.83665
  • 88.83665
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
2.55e3
  • 2.55e3
88.56797
  • 88.56797
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
3.99e3
  • 3.99e3
82.12028
  • 82.12028
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03006193
EnsemblENSCAFG00000005697 (CHMP6)
HGNCHGNC:25675 (CHMP6)
Uniprot/SPTREMBLF1PRE3, F1PRE3_CANLF

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