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C. lupus familiaris Gene: PSD2 - ENSCAFG00000005723 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000005723
NamePSD2
Descriptionpleckstrin and Sec7 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:19092]
OrganismCanis lupus familiaris (dog)
Synonym(s)dkfzp761b0514, efa6c
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.89e3
  • 3.89e3
  • 5.68e3
82.62
  • 82.62
  • 74.62
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
5.34e3
  • 5.34e3
76.12
  • 76.12
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
5.67e3
  • 5.67e3
74.65
  • 74.65
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.47e3
  • 6.47e3
71.07
  • 71.07
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
6.51e3
  • 6.51e3
70.91
  • 70.91
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
7.10e3
  • 7.10e3
68.24
  • 68.24
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
7.46e3
  • 7.46e3
66.66
  • 66.66
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
7.62e3
  • 7.62e3
65.92
  • 65.92
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
8.01e3
  • 8.01e3
64.21
  • 64.21
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.17e4
  • 1.17e4
  • 1.20e4
47.80
  • 47.80
  • 46.25
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.18e4
  • 1.18e4
  • 1.38e4
  • 1.39e4
47.29
  • 47.29
  • 38.29
  • 37.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.21e4
  • 1.21e4
45.82
  • 45.82
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.22e4
  • 1.22e4
45.35
  • 45.35
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
  • 1.47e4
  • 1.58e4
44.13
  • 44.13
  • 34.46
  • 29.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
43.79
  • 43.79
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
  • 1.38e4
42.28
  • 42.28
  • 38.34
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
  • 1.41e4
  • 1.62e4
42.19
  • 42.19
  • 36.84
  • 27.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
  • 1.40e4
41.85
  • 41.85
  • 37.36
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
  • 1.37e4
41.71
  • 41.71
  • 38.57
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
  • 1.44e4
41.55
  • 41.55
  • 35.68
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.31e4
  • 1.31e4
41.41
  • 41.41
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.32e4
  • 1.32e4
41.07
  • 41.07
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
40.05
  • 40.05
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.35e4
  • 1.35e4
39.55
  • 39.55
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
39.52
  • 39.52
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.37e4
  • 1.37e4
38.81
  • 38.81
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
38.76
  • 38.76
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
38.32
  • 38.32
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
38.03
  • 38.03
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.39e4
  • 1.39e4
37.82
  • 37.82
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
37.78
  • 37.78
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.40e4
  • 1.40e4
37.47
  • 37.47
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.41e4
  • 1.41e4
  • 1.52e4
36.94
  • 36.94
  • 31.87
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
  • 1.50e4
36.86
  • 36.86
  • 32.95
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
36.73
  • 36.73
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.42e4
  • 1.42e4
36.51
  • 36.51
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
  • 1.45e4
36.26
  • 36.26
  • 35.25
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
  • 1.51e4
35.90
  • 35.90
  • 32.53
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
35.78
  • 35.78
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
34.89
  • 34.89
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
  • 1.76e4
34.34
  • 34.34
  • 21.42
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
34.22
  • 34.22
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
  • 1.48e4
34.19
  • 34.19
  • 33.76
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
33.36
  • 33.36
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.51e4
  • 1.51e4
32.29
  • 32.29
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
  • 1.57e4
  • 1.61e4
  • 1.66e4
  • 1.72e4
31.98
  • 31.98
  • 29.94
  • 28.20
  • 25.56
  • 23.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
  • 1.58e4
31.67
  • 31.67
  • 29.26
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
  • 1.67e4
26.25
  • 26.25
  • 25.43
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000005723.

Cross-references

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