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C. lupus familiaris Gene: PSMD8 - ENSCAFG00000005931 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000005931
NamePSMD8
Descriptionproteasome 26S subunit, non-ATPase 8 [Source:HGNC Symbol;Acc:HGNC:9566]
OrganismCanis lupus familiaris (dog)
Synonym(s)hip6, hypf, nin1p, p31, rpn12, s14
Orthologs(s)29 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
305
  • 305
  • 1.15e3
98.64
  • 98.64
  • 94.88
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
351
  • 351
98.43
  • 98.43
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
352
  • 352
  • 874
98.43
  • 98.43
  • 96.10
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
655
  • 655
97.08
  • 97.08
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
814
  • 814
96.36
  • 96.36
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
826
  • 826
96.31
  • 96.31
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
854
  • 854
  • 1.25e3
  • 1.87e3
96.19
  • 96.19
  • 94.43
  • 91.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
867
  • 867
96.13
  • 96.13
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
869
  • 869
  • 974
96.12
  • 96.12
  • 95.65
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
886
  • 886
  • 1.06e3
96.04
  • 96.04
  • 95.26
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
892
  • 892
96.02
  • 96.02
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
940
  • 940
95.80
  • 95.80
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
954
  • 954
95.74
  • 95.74
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
981
  • 981
  • 1.29e3
  • 1.80e3
95.62
  • 95.62
  • 94.22
  • 91.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.00e3
  • 1.00e3
  • 1.23e3
95.52
  • 95.52
  • 94.52
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.00e3
  • 1.00e3
  • 1.07e3
95.52
  • 95.52
  • 95.21
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.00e3
  • 1.00e3
95.51
  • 95.51
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.01e3
  • 1.01e3
  • 1.30e3
95.50
  • 95.50
  • 94.21
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.08e3
  • 1.08e3
95.15
  • 95.15
AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.11e3
  • 1.11e3
95.06
  • 95.06
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.15e3
  • 1.15e3
94.86
  • 94.86
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.15e3
  • 1.15e3
94.85
  • 94.85
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.16e3
  • 1.16e3
94.81
  • 94.81
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.20e3
  • 1.20e3
  • 1.36e3
94.65
  • 94.65
  • 93.93
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.22e3
  • 1.22e3
  • 1.53e3
94.57
  • 94.57
  • 93.18
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.23e3
  • 1.23e3
  • 1.61e3
94.52
  • 94.52
  • 92.81
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.23e3
  • 1.23e3
94.51
  • 94.51
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.23e3
  • 1.23e3
94.49
  • 94.49
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.25e3
  • 1.25e3
94.44
  • 94.44
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.25e3
  • 1.25e3
94.43
  • 94.43
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.25e3
  • 1.25e3
  • 1.27e3
  • 1.53e3
  • 1.61e3
  • 1.86e3
94.43
  • 94.43
  • 94.33
  • 93.15
  • 92.80
  • 91.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.27e3
  • 1.27e3
94.33
  • 94.33
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.32e3
  • 1.32e3
  • 1.34e3
94.12
  • 94.12
  • 94.00
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.32e3
  • 1.32e3
94.11
  • 94.11
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.33e3
  • 1.33e3
94.07
  • 94.07
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.34e3
  • 1.34e3
93.99
  • 93.99
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.36e3
  • 1.36e3
  • 1.55e3
93.94
  • 93.94
  • 93.09
AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
1.36e3
  • 1.36e3
93.90
  • 93.90
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.38e3
  • 1.38e3
93.83
  • 93.83
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.40e3
  • 1.40e3
  • 2.12e3
93.75
  • 93.75
  • 90.54
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.41e3
  • 1.41e3
93.70
  • 93.70
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.44e3
  • 1.44e3
  • 1.95e3
93.58
  • 93.58
  • 91.28
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.45e3
  • 1.45e3
  • 2.83e3
93.52
  • 93.52
  • 87.34
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.45e3
  • 1.45e3
  • 1.96e3
  • 1.98e3
93.51
  • 93.51
  • 91.24
  • 91.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.45e3
  • 1.45e3
93.50
  • 93.50
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.47e3
  • 1.47e3
93.41
  • 93.41
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.51e3
  • 1.51e3
93.27
  • 93.27
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.53e3
  • 1.53e3
93.18
  • 93.18
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
1.53e3
  • 1.53e3
93.16
  • 93.16
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.65e3
  • 1.65e3
92.64
  • 92.64
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.88e3
  • 1.88e3
91.59
  • 91.59
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.97e3
  • 1.97e3
  • 4.41e3
91.20
  • 91.20
  • 80.30
AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.98e3
  • 1.98e3
91.14
  • 91.14
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
2.12e3
  • 2.12e3
90.53
  • 90.53
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
3.18e3
  • 3.18e3
85.78
  • 85.78
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria10 species11 genesCompare expression
Theria11 species13 genesCompare expression
Amniota12 species14 genesCompare expression
Tetrapoda13 species15 genesCompare expression
Euteleostomi14 species16 genesCompare expression
Bilateria21 species29 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000005931.

Cross-references

EnsemblENSCAFG00000005931 (PSMD8)
HGNCHGNC:9566 (PSMD8)
EMBLAAEX03000975
Uniprot/SPTREMBLE2QY43, E2QY43_CANLF

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