C. lupus familiaris Gene: TRNT1 - ENSCAFG00000005985 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000005985
NameTRNT1
DescriptiontRNA nucleotidyl transferase, CCA-adding, 1 [Source:HGNC Symbol;Acc:HGNC:17341]
OrganismCanis lupus familiaris (dog)
Synonym(s)cca1, cgi-47, mtcca

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.41e3
  • 1.41e3
  • 3.15e3
93.67723
  • 93.67723
  • 85.90305
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
1.91e3
  • 1.91e3
91.45621
  • 91.45621
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.95e3
  • 1.95e3
  • 3.75e3
91.28855
  • 91.28855
  • 83.23460
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.03e3
  • 2.03e3
  • 4.47e3
  • 6.70e3
90.89813
  • 90.89813
  • 79.97492
  • 69.98478
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
2.07e3
  • 2.07e3
  • 5.15e3
90.72121
  • 90.72121
  • 76.93444
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.23e3
  • 2.23e3
  • 5.18e3
90.00985
  • 90.00985
  • 76.82362
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
2.43e3
  • 2.43e3
89.10980
  • 89.10980
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
2.47e3
  • 2.47e3
88.93964
  • 88.93964
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
2.49e3
  • 2.49e3
88.84112
  • 88.84112
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
2.59e3
  • 2.59e3
88.42020
  • 88.42020
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.60e3
  • 2.60e3
  • 5.77e3
88.34408
  • 88.34408
  • 74.18597
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
2.62e3
  • 2.62e3
88.25452
  • 88.25452
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
2.67e3
  • 2.67e3
88.03958
  • 88.03958
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
2.73e3
  • 2.73e3
87.76406
  • 87.76406
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.87e3
  • 2.87e3
  • 4.67e3
87.13505
  • 87.13505
  • 79.09860
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
3.01e3
  • 3.01e3
86.53054
  • 86.53054
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
3.02e3
  • 3.02e3
86.49472
  • 86.49472
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
3.11e3
  • 3.11e3
86.09171
  • 86.09171
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
3.18e3
  • 3.18e3
85.76482
  • 85.76482
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
3.21e3
  • 3.21e3
85.63049
  • 85.63049
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.22e3
  • 3.22e3
  • 4.09e3
  • 4.20e3
  • 5.83e3
85.60384
  • 85.60384
  • 81.68100
  • 81.21131
  • 73.91635
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.22e3
  • 3.22e3
  • 3.63e3
85.58123
  • 85.58123
  • 83.74642
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.27e3
  • 3.27e3
  • 3.61e3
85.36629
  • 85.36629
  • 83.85622
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
3.29e3
  • 3.29e3
85.29464
  • 85.29464
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
3.38e3
  • 3.38e3
84.87820
  • 84.87820
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.39e3
  • 3.39e3
  • 5.18e3
84.83383
  • 84.83383
  • 76.80906
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
3.42e3
  • 3.42e3
84.68565
  • 84.68565
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.46e3
  • 3.46e3
  • 5.24e3
84.49310
  • 84.49310
  • 76.55382
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.50e3
  • 3.50e3
  • 3.67e3
84.34869
  • 84.34869
  • 83.56363
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.57e3
  • 3.57e3
  • 3.94e3
84.03636
  • 84.03636
  • 82.35716
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
3.59e3
  • 3.59e3
83.91546
  • 83.91546
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
3.72e3
  • 3.72e3
83.33333
  • 83.33333
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
3.76e3
  • 3.76e3
83.16317
  • 83.16317
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.76e3
  • 3.76e3
  • 5.42e3
83.15422
  • 83.15422
  • 75.75676
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
4.11e3
  • 4.11e3
81.60935
  • 81.60935
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
4.13e3
  • 4.13e3
81.52955
  • 81.52955
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
4.26e3
  • 4.26e3
80.94662
  • 80.94662
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.26e3
  • 4.26e3
80.90905
  • 80.90905
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
4.28e3
  • 4.28e3
  • 4.95e3
80.86154
  • 80.86154
  • 77.83898
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
4.31e3
  • 4.31e3
80.69586
  • 80.69586
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
4.34e3
  • 4.34e3
80.56600
  • 80.56600
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
4.45e3
  • 4.45e3
80.06000
  • 80.06000
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
4.49e3
  • 4.49e3
79.90328
  • 79.90328
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
4.51e3
  • 4.51e3
79.82120
  • 79.82120
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
4.51e3
  • 4.51e3
79.81372
  • 79.81372
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
4.51e3
  • 4.51e3
79.81090
  • 79.81090
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
4.61e3
  • 4.61e3
79.37489
  • 79.37489
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
4.63e3
  • 4.63e3
79.25846
  • 79.25846
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
4.78e3
  • 4.78e3
78.58808
  • 78.58808
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.04e3
  • 5.04e3
77.42701
  • 77.42701
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
5.81e3
  • 5.81e3
74.01039
  • 74.01039
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.93e3
  • 6.93e3
68.97725
  • 68.97725
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03012103
EnsemblENSCAFG00000005985 (TRNT1)
HGNCHGNC:17341 (TRNT1)
Uniprot/SPTREMBLE2R8M0, E2R8M0_CANLF

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