C. lupus familiaris Gene: TRIM21 - ENSCAFG00000006025 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000006025
NameTRIM21
Descriptiontripartite motif containing 21 [Source:HGNC Symbol;Acc:HGNC:11312]
OrganismCanis lupus familiaris (dog)
Synonym(s)rnf81, ro/ssa, ro52, ssa1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.84e3
  • 3.84e3
  • 1.58e4
82.81390
  • 82.81390
  • 29.44004
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
7.19e3
  • 7.19e3
67.81300
  • 67.81300
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.76e3
  • 7.76e3
  • 1.15e4
65.26706
  • 65.26706
  • 48.69246
AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
8.79e3
  • 8.79e3
60.63049
  • 60.63049
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
9.06e3
  • 9.06e3
59.43489
  • 59.43489
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.08e3
  • 9.08e3
  • 1.05e4
59.34086
  • 59.34086
  • 52.82590
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
9.44e3
  • 9.44e3
57.73778
  • 57.73778
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
9.93e3
  • 9.93e3
55.56153
  • 55.56153
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.93e3
  • 9.93e3
  • 9.98e3
  • 1.01e4
  • 1.06e4
55.54361
  • 55.54361
  • 55.29733
  • 54.71230
  • 52.31547
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
54.97940
  • 54.97940
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
1.01e4
  • 1.01e4
54.61222
  • 54.61222
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.02e4
  • 1.02e4
  • 1.20e4
54.18234
  • 54.18234
  • 46.39746
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
53.78538
  • 53.78538
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.04e4
  • 1.04e4
  • 1.17e4
53.48827
  • 53.48827
  • 47.82375
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.04e4
  • 1.04e4
  • 1.18e4
53.47483
  • 53.47483
  • 47.32223
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.05e4
  • 1.05e4
  • 1.09e4
53.08293
  • 53.08293
  • 51.35124
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.06e4
  • 1.06e4
52.34641
  • 52.34641
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.07e4
  • 1.07e4
  • 1.25e4
52.11826
  • 52.11826
  • 44.11629
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
51.76428
  • 51.76428
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
1.08e4
  • 1.08e4
51.42844
  • 51.42844
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
51.08365
  • 51.08365
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.09e4
  • 1.09e4
  • 1.13e4
51.06126
  • 51.06126
  • 49.26563
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.10e4
  • 1.10e4
50.95827
  • 50.95827
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.10e4
  • 1.10e4
  • 1.15e4
50.82653
  • 50.82653
  • 48.55364
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
50.57200
  • 50.57200
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.10e4
  • 1.10e4
  • 1.17e4
  • 1.18e4
50.55078
  • 50.55078
  • 47.47000
  • 47.03829
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.13e4
  • 1.13e4
49.39101
  • 49.39101
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.14e4
  • 1.14e4
49.17159
  • 49.17159
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
48.85501
  • 48.85501
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.14e4
  • 1.14e4
48.83127
  • 48.83127
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.15e4
  • 1.15e4
  • 1.17e4
48.71933
  • 48.71933
  • 47.47448
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
48.71037
  • 48.71037
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.16e4
  • 1.16e4
48.25363
  • 48.25363
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
  • 1.19e4
48.20437
  • 48.20437
  • 46.59551
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
48.09690
  • 48.09690
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
48.05212
  • 48.05212
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
1.20e4
  • 1.20e4
46.16694
  • 46.16694
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.20e4
  • 1.20e4
46.07738
  • 46.07738
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.24e4
  • 1.24e4
44.60416
  • 44.60416
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.25e4
  • 1.25e4
43.81157
  • 43.81157
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
42.28014
  • 42.28014
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
42.13237
  • 42.13237
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
41.74279
  • 41.74279
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.35e4
  • 1.35e4
39.76034
  • 39.76034
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
38.59932
  • 38.59932
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
36.85295
  • 36.85295
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
  • 1.49e4
33.18109
  • 33.18109
  • 33.07111
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.49e4
  • 1.49e4
33.15955
  • 33.15955
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.50e4
  • 1.50e4
32.95719
  • 32.95719
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.53e4
  • 1.53e4
31.39638
  • 31.39638
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
29.21986
  • 29.21986
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03012839
EnsemblENSCAFG00000006025 (TRIM21)
HGNCHGNC:11312 (TRIM21)
Uniprot/SPTREMBLE2R173, E2R173_CANLF

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