C. lupus familiaris Gene: CEP290 - ENSCAFG00000006027 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000006027
NameCEP290
Descriptioncentrosomal protein 290kDa [Source:HGNC Symbol;Acc:HGNC:29021]
OrganismCanis lupus familiaris (dog)
Synonym(s)3h11ag, bbs14, ct87, flj13615, jbts5, kiaa0373, lca10, mks4, nphp6, poc3, rd16, slsn6

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.48e3
  • 3.48e3
  • 1.23e4
84.40355
  • 84.40355
  • 45.02252
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.85e3
  • 3.85e3
  • 1.20e4
82.78255
  • 82.78255
  • 46.39499
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
6.87e3
  • 6.87e3
69.24145
  • 69.24145
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
7.57e3
  • 7.57e3
  • 1.05e4
66.10245
  • 66.10245
  • 52.95818
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.97e3
  • 7.97e3
  • 1.12e4
64.33186
  • 64.33186
  • 49.69103
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
8.84e3
  • 8.84e3
60.43346
  • 60.43346
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
8.86e3
  • 8.86e3
60.31703
  • 60.31703
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.93e3
  • 8.93e3
  • 1.04e4
  • 1.29e4
59.99557
  • 59.99557
  • 53.34945
  • 42.23088
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
9.04e3
  • 9.04e3
  • 1.36e4
59.50734
  • 59.50734
  • 39.20383
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.14e3
  • 9.14e3
  • 1.06e4
59.07666
  • 59.07666
  • 52.53287
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
9.27e3
  • 9.27e3
58.49901
  • 58.49901
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
9.35e3
  • 9.35e3
58.12708
  • 58.12708
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
9.41e3
  • 9.41e3
57.86763
  • 57.86763
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.55e3
  • 9.55e3
  • 1.01e4
  • 1.07e4
  • 1.18e4
57.25416
  • 57.25416
  • 54.98119
  • 51.95692
  • 47.04460
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
9.65e3
  • 9.65e3
56.79294
  • 56.79294
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.70e3
  • 9.70e3
  • 9.77e3
56.56323
  • 56.56323
  • 56.25139
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
9.79e3
  • 9.79e3
56.15762
  • 56.15762
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
9.95e3
  • 9.95e3
55.44958
  • 55.44958
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.00e4
  • 1.00e4
  • 1.07e4
55.06045
  • 55.06045
  • 51.91205
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
  • 1.26e4
54.59430
  • 54.59430
  • 43.71306
AEIR
  • AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
1.02e4
  • 1.02e4
54.51818
  • 54.51818
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.03e4
  • 1.03e4
53.82411
  • 53.82411
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.04e4
  • 1.04e4
53.38975
  • 53.38975
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
  • 1.27e4
53.33602
  • 53.33602
  • 43.09959
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.04e4
  • 1.04e4
  • 1.10e4
53.24198
  • 53.24198
  • 50.69407
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.05e4
  • 1.05e4
52.77629
  • 52.77629
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
52.41971
  • 52.41971
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.07e4
  • 1.07e4
52.28820
  • 52.28820
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
52.02714
  • 52.02714
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.07e4
  • 1.07e4
51.96579
  • 51.96579
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
50.95034
  • 50.95034
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
49.74476
  • 49.74476
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
49.06354
  • 49.06354
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
  • 1.21e4
48.78399
  • 48.78399
  • 45.89629
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
48.18646
  • 48.18646
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
1.16e4
  • 1.16e4
48.10586
  • 48.10586
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
47.59986
  • 47.59986
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.24e4
47.29984
  • 47.29984
  • 44.66237
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.18e4
  • 1.18e4
47.07594
  • 47.07594
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.19e4
  • 1.19e4
  • 1.23e4
46.49816
  • 46.49816
  • 45.05642
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
46.47591
  • 46.47591
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
1.20e4
  • 1.20e4
46.40874
  • 46.40874
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
46.09529
  • 46.09529
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
46.02364
  • 46.02364
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
45.69228
  • 45.69228
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
44.94895
  • 44.94895
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
44.92208
  • 44.92208
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
44.62654
  • 44.62654
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
44.36235
  • 44.36235
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
44.26831
  • 44.26831
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
41.03081
  • 41.03081
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03009910
EnsemblENSCAFG00000006027 (CEP290)
HGNCHGNC:29021 (CEP290)
Uniprot/SPTREMBLE2R0F5, E2R0F5_CANLF, F1Q2D1, F1Q2D1_CANLF

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