C. lupus familiaris Gene: SOX1 - ENSCAFG00000006137 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000006137
NameSOX1
DescriptionSRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
OrganismCanis lupus familiaris (dog)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
  • 1.77e4
41.98648
  • 41.98648
  • 20.85796
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
40.25166
  • 40.25166
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
39.27996
  • 39.27996
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
36.98728
  • 36.98728
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
36.39567
  • 36.39567
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
36.29361
  • 36.29361
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
31.68547
  • 31.68547
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
30.28838
  • 30.28838
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.59e4
  • 1.59e4
28.60568
  • 28.60568
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.67e4
  • 1.67e4
25.18283
  • 25.18283
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.68e4
  • 1.68e4
24.95970
  • 24.95970
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.70e4
  • 1.70e4
23.70616
  • 23.70616
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.74e4
  • 1.74e4
21.95974
  • 21.95974
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03013405, AAEX03013406
EnsemblENSCAFG00000006137 (SOX1)
HGNCHGNC:11189 (SOX1)
Uniprot/SPTREMBLE2R420, E2R420_CANLF

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