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C. lupus familiaris Gene: CDC42EP3 - ENSCAFG00000006151 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000006151
NameCDC42EP3
DescriptionCDC42 effector protein (Rho GTPase binding) 3 [Source:HGNC Symbol;Acc:HGNC:16943]
OrganismCanis lupus familiaris (dog)
Synonym(s)borg2, cep3, ub1
Orthologs(s)15 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
497
  • 497
  • 1.79e3
97.78
  • 97.78
  • 92.02
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
668
  • 668
97.02
  • 97.02
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
700
  • 700
96.87
  • 96.87
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
898
  • 898
  • 1.98e3
  • 4.17e3
95.99
  • 95.99
  • 91.13
  • 81.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
924
  • 924
  • 2.35e3
95.87
  • 95.87
  • 89.50
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
947
  • 947
  • 3.19e3
95.77
  • 95.77
  • 85.74
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.05e3
  • 1.05e3
  • 2.57e3
95.32
  • 95.32
  • 88.52
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.15e3
  • 1.15e3
94.86
  • 94.86
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.16e3
  • 1.16e3
94.81
  • 94.81
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.17e3
  • 1.17e3
  • 1.26e3
94.79
  • 94.79
  • 94.38
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.19e3
  • 1.19e3
  • 1.45e3
  • 2.92e3
94.70
  • 94.70
  • 93.53
  • 86.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.23e3
  • 1.23e3
  • 2.14e3
94.51
  • 94.51
  • 90.43
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.36e3
  • 1.36e3
93.93
  • 93.93
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.40e3
  • 1.40e3
93.73
  • 93.73
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
1.41e3
  • 1.41e3
93.71
  • 93.71
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.42e3
  • 1.42e3
93.64
  • 93.64
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.49e3
  • 1.49e3
93.35
  • 93.35
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.52e3
  • 1.52e3
93.19
  • 93.19
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.56e3
  • 1.56e3
93.01
  • 93.01
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.60e3
  • 1.60e3
92.86
  • 92.86
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.67e3
  • 1.67e3
  • 2.24e3
  • 2.95e3
92.55
  • 92.55
  • 89.97
  • 86.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.71e3
  • 1.71e3
92.34
  • 92.34
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.75e3
  • 1.75e3
92.16
  • 92.16
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.76e3
  • 1.76e3
  • 4.87e3
92.13
  • 92.13
  • 78.24
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.86e3
  • 1.86e3
91.69
  • 91.69
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.87e3
  • 1.87e3
  • 4.23e3
91.64
  • 91.64
  • 81.07
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.92e3
  • 1.92e3
91.44
  • 91.44
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.05e3
  • 2.05e3
  • 3.71e3
90.85
  • 90.85
  • 83.40
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.08e3
  • 2.08e3
  • 4.43e3
90.71
  • 90.71
  • 80.20
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
2.33e3
  • 2.33e3
89.59
  • 89.59
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
2.39e3
  • 2.39e3
89.32
  • 89.32
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.46e3
  • 2.46e3
89.01
  • 89.01
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
2.54e3
  • 2.54e3
  • 4.09e3
88.62
  • 88.62
  • 81.72
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.59e3
  • 2.59e3
  • 5.77e3
88.40
  • 88.40
  • 74.19
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
2.60e3
  • 2.60e3
88.39
  • 88.39
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
2.68e3
  • 2.68e3
88.01
  • 88.01
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.74e3
  • 2.74e3
  • 6.22e3
87.75
  • 87.75
  • 72.18
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.86e3
  • 2.86e3
  • 5.33e3
87.21
  • 87.21
  • 76.15
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
3.10e3
  • 3.10e3
86.15
  • 86.15
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
4.16e3
  • 4.16e3
81.39
  • 81.39
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
4.36e3
  • 4.36e3
80.51
  • 80.51
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
4.47e3
  • 4.47e3
80.02
  • 80.02
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
4.65e3
  • 4.65e3
79.20
  • 79.20
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.77e3
  • 4.77e3
  • 5.74e3
78.68
  • 78.68
  • 74.35
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
4.83e3
  • 4.83e3
78.42
  • 78.42
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.85e3
  • 4.85e3
  • 6.31e3
78.32
  • 78.32
  • 71.79
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.18e3
  • 5.18e3
  • 5.31e3
  • 5.63e3
  • 8.74e3
  • 9.68e3
76.82
  • 76.82
  • 76.26
  • 74.85
  • 60.91
  • 56.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
5.47e3
  • 5.47e3
75.54
  • 75.54
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
5.78e3
  • 5.78e3
74.16
  • 74.16
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
5.91e3
  • 5.91e3
73.57
  • 73.57
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
6.51e3
  • 6.51e3
70.88
  • 70.88
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
7.14e3
  • 7.14e3
68.06
  • 68.06
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
8.66e3
  • 8.66e3
61.28
  • 61.28
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.52e3
  • 9.52e3
57.42
  • 57.42
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.01e4
  • 1.01e4
54.64
  • 54.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000006151.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSCAFG00000006151.

Cross-references

EnsemblENSCAFG00000006151 (CDC42EP3)
HGNCHGNC:16943 (CDC42EP3)
EMBLAAEX03010860
Uniprot/SPTREMBLE2QX64, E2QX64_CANLF

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