C. lupus familiaris Gene: SPG20 - ENSCAFG00000006178 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000006178
NameSPG20
Descriptionspastic paraplegia 20 (Troyer syndrome) [Source:HGNC Symbol;Acc:HGNC:18514]
OrganismCanis lupus familiaris (dog)
Synonym(s)kiaa0610, tahccp1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0018241prime adult stage
3.07e3
  • 3.07e3
83.27958
  • 83.27958
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
4.46e3
  • 4.46e3
75.73994
  • 75.73994
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.72e3
  • 4.72e3
74.31841
  • 74.31841
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03014208
EnsemblENSCAFG00000006178 (SPG20)
HGNCHGNC:18514 (SPG20)
Uniprot/SPTREMBLE2R242, E2R242_CANLF, J9NTP1, J9NTP1_CANLF

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