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C. lupus familiaris Gene: LAMP1 - ENSCAFG00000006323 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000006323
NameLAMP1
Descriptionlysosomal-associated membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:6499]
OrganismCanis lupus familiaris (dog)
Synonym(s)cd107a
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
194
  • 194
99.14
  • 99.14
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
262
  • 262
  • 350
  • 639
98.83
  • 98.83
  • 98.44
  • 97.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
283
  • 283
  • 330
98.74
  • 98.74
  • 98.53
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
322
  • 322
98.56
  • 98.56
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
322
  • 322
  • 453
  • 944
98.56
  • 98.56
  • 97.98
  • 95.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
361
  • 361
98.39
  • 98.39
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
368
  • 368
98.36
  • 98.36
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
369
  • 369
  • 611
98.35
  • 98.35
  • 97.27
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
370
  • 370
98.35
  • 98.35
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
373
  • 373
98.34
  • 98.34
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
377
  • 377
98.32
  • 98.32
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
395
  • 395
  • 484
  • 543
  • 550
  • 718
98.24
  • 98.24
  • 97.84
  • 97.58
  • 97.54
  • 96.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
420
  • 420
98.13
  • 98.13
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
422
  • 422
98.12
  • 98.12
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
444
  • 444
  • 1.11e3
98.02
  • 98.02
  • 95.05
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
448
  • 448
98.00
  • 98.00
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
454
  • 454
97.97
  • 97.97
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
455
  • 455
97.97
  • 97.97
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
457
  • 457
  • 487
97.96
  • 97.96
  • 97.83
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
460
  • 460
  • 3.61e3
97.95
  • 97.95
  • 83.86
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
467
  • 467
97.92
  • 97.92
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
471
  • 471
97.90
  • 97.90
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
474
  • 474
97.88
  • 97.88
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
475
  • 475
97.88
  • 97.88
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
482
  • 482
  • 593
97.85
  • 97.85
  • 97.35
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
487
  • 487
97.83
  • 97.83
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
488
  • 488
97.82
  • 97.82
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
492
  • 492
  • 699
97.80
  • 97.80
  • 96.88
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
508
  • 508
97.73
  • 97.73
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
508
  • 508
97.73
  • 97.73
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
511
  • 511
  • 843
97.72
  • 97.72
  • 96.23
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
523
  • 523
  • 800
97.67
  • 97.67
  • 96.43
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
528
  • 528
  • 550
  • 635
97.64
  • 97.64
  • 97.54
  • 97.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
538
  • 538
97.60
  • 97.60
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
544
  • 544
97.57
  • 97.57
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
548
  • 548
97.55
  • 97.55
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
551
  • 551
97.54
  • 97.54
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
552
  • 552
97.54
  • 97.54
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
574
  • 574
97.44
  • 97.44
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
585
  • 585
97.39
  • 97.39
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
599
  • 599
  • 906
97.33
  • 97.33
  • 95.95
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
607
  • 607
  • 854
97.29
  • 97.29
  • 96.19
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
608
  • 608
  • 691
97.29
  • 97.29
  • 96.91
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
652
  • 652
97.09
  • 97.09
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
681
  • 681
  • 716
96.96
  • 96.96
  • 96.80
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
698
  • 698
96.88
  • 96.88
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
702
  • 702
  • 865
96.86
  • 96.86
  • 96.14
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
727
  • 727
96.75
  • 96.75
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
737
  • 737
96.71
  • 96.71
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
741
  • 741
96.69
  • 96.69
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
779
  • 779
96.52
  • 96.52
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
833
  • 833
96.28
  • 96.28
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
853
  • 853
  • 1.03e3
96.19
  • 96.19
  • 95.41
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
878
  • 878
96.08
  • 96.08
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
912
  • 912
95.93
  • 95.93
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.24e3
  • 1.24e3
94.48
  • 94.48
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000006323.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSCAFG00000006323.

Cross-references

EnsemblENSCAFG00000006323 (LAMP1)
HGNCHGNC:6499 (LAMP1)
EMBLAAEX03013408
Uniprot/SPTREMBLF1Q260, F1Q260_CANLF

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