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C. lupus familiaris Gene: CACNA2D1 - ENSCAFG00000006339 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000006339
NameCACNA2D1
Descriptioncalcium channel, voltage-dependent, alpha 2/delta subunit 1 [Source:HGNC Symbol;Acc:HGNC:1399]
OrganismCanis lupus familiaris (dog)
Synonym(s)cacna2, cacnl2a, linc01112, lncrna-n3, mhs3
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
577
  • 577
  • 939
97.42
  • 97.42
  • 95.81
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
917
  • 917
95.90
  • 95.90
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.50e3
  • 1.50e3
93.28
  • 93.28
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.58e3
  • 1.58e3
92.95
  • 92.95
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
2.10e3
  • 2.10e3
90.61
  • 90.61
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
2.29e3
  • 2.29e3
  • 4.49e3
89.79
  • 89.79
  • 79.94
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
2.68e3
  • 2.68e3
88.00
  • 88.00
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.00e3
  • 3.00e3
  • 5.05e3
86.57
  • 86.57
  • 77.43
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.03e3
  • 3.03e3
  • 4.12e3
86.45
  • 86.45
  • 81.59
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
3.05e3
  • 3.05e3
86.36
  • 86.36
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.17e3
  • 3.17e3
  • 3.31e3
85.83
  • 85.83
  • 85.20
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
3.27e3
  • 3.27e3
85.40
  • 85.40
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
3.29e3
  • 3.29e3
85.30
  • 85.30
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
3.32e3
  • 3.32e3
85.17
  • 85.17
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
3.66e3
  • 3.66e3
83.62
  • 83.62
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.72e3
  • 3.72e3
  • 1.17e4
83.39
  • 83.39
  • 47.53
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
4.02e3
  • 4.02e3
82.05
  • 82.05
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.35e3
  • 4.35e3
  • 8.33e3
80.55
  • 80.55
  • 62.73
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
4.76e3
  • 4.76e3
78.74
  • 78.74
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
4.96e3
  • 4.96e3
77.84
  • 77.84
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
5.46e3
  • 5.46e3
  • 1.07e4
75.57
  • 75.57
  • 52.18
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
5.51e3
  • 5.51e3
  • 1.32e4
75.35
  • 75.35
  • 41.09
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
5.64e3
  • 5.64e3
74.77
  • 74.77
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
6.12e3
  • 6.12e3
72.63
  • 72.63
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
6.34e3
  • 6.34e3
71.67
  • 71.67
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.40e3
  • 6.40e3
  • 6.88e3
71.37
  • 71.37
  • 69.25
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
7.27e3
  • 7.27e3
67.49
  • 67.49
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
7.29e3
  • 7.29e3
67.41
  • 67.41
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
7.78e3
  • 7.78e3
65.20
  • 65.20
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
7.86e3
  • 7.86e3
  • 8.41e3
  • 9.25e3
64.86
  • 64.86
  • 62.39
  • 58.62
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.21e3
  • 8.21e3
  • 1.07e4
63.27
  • 63.27
  • 52.26
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
8.25e3
  • 8.25e3
  • 1.12e4
63.10
  • 63.10
  • 50.01
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
8.42e3
  • 8.42e3
62.36
  • 62.36
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
8.44e3
  • 8.44e3
62.26
  • 62.26
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
8.78e3
  • 8.78e3
60.74
  • 60.74
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
9.06e3
  • 9.06e3
59.48
  • 59.48
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
9.07e3
  • 9.07e3
  • 1.04e4
  • 1.38e4
59.42
  • 59.42
  • 53.48
  • 38.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.21e3
  • 9.21e3
  • 1.11e4
58.80
  • 58.80
  • 50.34
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
9.28e3
  • 9.28e3
58.51
  • 58.51
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
9.52e3
  • 9.52e3
57.42
  • 57.42
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
9.70e3
  • 9.70e3
56.61
  • 56.61
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
9.74e3
  • 9.74e3
56.46
  • 56.46
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
  • 1.07e4
  • 1.17e4
54.13
  • 54.13
  • 52.19
  • 47.79
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
53.55
  • 53.55
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
  • 1.16e4
52.02
  • 52.02
  • 47.95
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
46.31
  • 46.31
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
45.35
  • 45.35
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
44.60
  • 44.60
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
  • 1.35e4
  • 1.37e4
  • 1.46e4
  • 1.49e4
43.96
  • 43.96
  • 39.50
  • 38.82
  • 34.60
  • 33.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
43.16
  • 43.16
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
27.58
  • 27.58
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000006339.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSCAFG00000006339.

Cross-references

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