C. lupus familiaris Gene: SOX12 - ENSCAFG00000006973 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000006973
NameSOX12
DescriptionSRY-box 12 [Source:HGNC Symbol;Acc:HGNC:11198]
OrganismCanis lupus familiaris (dog)
Synonym(s)sox22
Orthologs(s)7 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
3.28e3
  • 3.28e3
  • 1.30e4
85.36
  • 85.36
  • 41.66
AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
4.18e3
  • 4.18e3
81.32
  • 81.32
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
4.39e3
  • 4.39e3
  • 9.94e3
80.36
  • 80.36
  • 55.54
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
4.57e3
  • 4.57e3
79.58
  • 79.58
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
4.63e3
  • 4.63e3
79.31
  • 79.31
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
5.49e3
  • 5.49e3
75.45
  • 75.45
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.10e3
  • 6.10e3
  • 1.17e4
  • 1.36e4
72.72
  • 72.72
  • 47.55
  • 39.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.46e3
  • 6.46e3
  • 1.11e4
71.10
  • 71.10
  • 50.38
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
6.56e3
  • 6.56e3
  • 6.81e3
  • 1.23e4
70.66
  • 70.66
  • 69.56
  • 44.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
6.64e3
  • 6.64e3
70.29
  • 70.29
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
6.75e3
  • 6.75e3
69.83
  • 69.83
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.04e3
  • 7.04e3
  • 1.19e4
68.52
  • 68.52
  • 46.71
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
7.48e3
  • 7.48e3
66.53
  • 66.53
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
7.73e3
  • 7.73e3
  • 1.24e4
65.44
  • 65.44
  • 44.72
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
8.23e3
  • 8.23e3
63.18
  • 63.18
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
8.50e3
  • 8.50e3
  • 1.24e4
61.98
  • 61.98
  • 44.71
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.53e3
  • 8.53e3
61.87
  • 61.87
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.77e3
  • 8.77e3
  • 9.80e3
60.77
  • 60.77
  • 56.20
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.01e3
  • 9.01e3
  • 1.19e4
59.72
  • 59.72
  • 46.84
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.19e3
  • 9.19e3
  • 9.95e3
58.90
  • 58.90
  • 55.53
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
9.24e3
  • 9.24e3
58.68
  • 58.68
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
9.29e3
  • 9.29e3
  • 1.12e4
  • 1.22e4
58.45
  • 58.45
  • 49.98
  • 45.34
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
9.36e3
  • 9.36e3
58.15
  • 58.15
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
9.47e3
  • 9.47e3
  • 1.22e4
57.65
  • 57.65
  • 45.23
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
9.51e3
  • 9.51e3
57.47
  • 57.47
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
9.72e3
  • 9.72e3
56.56
  • 56.56
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
54.32
  • 54.32
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
53.88
  • 53.88
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
52.10
  • 52.10
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.08e4
  • 1.08e4
  • 1.25e4
  • 1.32e4
  • 1.40e4
  • 1.46e4
51.55
  • 51.55
  • 43.93
  • 40.79
  • 37.43
  • 34.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
51.13
  • 51.13
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
50.75
  • 50.75
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.11e4
  • 1.11e4
50.44
  • 50.44
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
50.23
  • 50.23
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
50.15
  • 50.15
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
49.84
  • 49.84
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.12e4
  • 1.12e4
49.72
  • 49.72
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
49.30
  • 49.30
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.15e4
  • 1.15e4
48.60
  • 48.60
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
47.94
  • 47.94
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
47.58
  • 47.58
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
47.47
  • 47.47
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.18e4
  • 1.18e4
47.27
  • 47.27
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
46.93
  • 46.93
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.20e4
  • 1.20e4
46.28
  • 46.28
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.23e4
  • 1.23e4
44.95
  • 44.95
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.25e4
  • 1.25e4
  • 1.34e4
44.06
  • 44.06
  • 39.88
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.26e4
  • 1.26e4
43.61
  • 43.61
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
43.19
  • 43.19
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
42.10
  • 42.10
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.30e4
  • 1.30e4
  • 1.30e4
41.84
  • 41.84
  • 41.70
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
  • 1.46e4
41.69
  • 41.69
  • 34.91
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.38e4
  • 1.38e4
38.48
  • 38.48
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.39e4
  • 1.39e4
38.06
  • 38.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSCAFG00000006973 (SOX12)
HGNCHGNC:11198 (SOX12)
EMBLAAEX03013862
Uniprot/SPTREMBLE2RH58, E2RH58_CANLF

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