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C. lupus familiaris Gene: RNF180 - ENSCAFG00000007280 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000007280
NameRNF180
Descriptionring finger protein 180 [Source:HGNC Symbol;Acc:HGNC:27752]
OrganismCanis lupus familiaris (dog)
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.57e3
  • 2.57e3
88.51
  • 88.51
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
4.07e3
  • 4.07e3
81.83
  • 81.83
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
4.38e3
  • 4.38e3
80.41
  • 80.41
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
4.66e3
  • 4.66e3
79.15
  • 79.15
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
4.88e3
  • 4.88e3
78.18
  • 78.18
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
7.19e3
  • 7.19e3
67.87
  • 67.87
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
7.38e3
  • 7.38e3
67.00
  • 67.00
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
7.51e3
  • 7.51e3
66.41
  • 66.41
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
7.80e3
  • 7.80e3
65.14
  • 65.14
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.88e3
  • 7.88e3
64.79
  • 64.79
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.68e3
  • 8.68e3
  • 1.06e4
61.19
  • 61.19
  • 52.64
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.81e3
  • 8.81e3
  • 1.15e4
60.60
  • 60.60
  • 48.49
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
9.05e3
  • 9.05e3
59.54
  • 59.54
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.27e3
  • 9.27e3
  • 1.33e4
58.54
  • 58.54
  • 40.48
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
9.28e3
  • 9.28e3
58.51
  • 58.51
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.01e4
  • 1.01e4
54.84
  • 54.84
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.04e4
  • 1.04e4
53.71
  • 53.71
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.04e4
  • 1.04e4
53.51
  • 53.51
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
51.21
  • 51.21
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.09e4
  • 1.09e4
51.17
  • 51.17
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
  • 1.09e4
51.14
  • 51.14
  • 51.05
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.09e4
  • 1.09e4
51.09
  • 51.09
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
  • 1.36e4
  • 1.47e4
50.36
  • 50.36
  • 39.21
  • 34.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
48.24
  • 48.24
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
  • 1.40e4
46.17
  • 46.17
  • 37.58
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.22e4
  • 1.22e4
45.29
  • 45.29
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
  • 1.72e4
44.96
  • 44.96
  • 23.25
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.24e4
  • 1.24e4
44.50
  • 44.50
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.26e4
  • 1.26e4
  • 1.34e4
43.75
  • 43.75
  • 40.30
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
43.40
  • 43.40
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
  • 1.54e4
42.36
  • 42.36
  • 31.19
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
41.10
  • 41.10
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
41.03
  • 41.03
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
  • 1.86e4
38.35
  • 38.35
  • 16.74
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
  • 1.70e4
35.71
  • 35.71
  • 24.13
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
33.24
  • 33.24
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
32.69
  • 32.69
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
  • 1.53e4
  • 2.00e4
32.14
  • 32.14
  • 31.48
  • 10.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.53e4
  • 1.53e4
31.39
  • 31.39
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
31.05
  • 31.05
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.58e4
  • 1.58e4
29.29
  • 29.29
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.60e4
  • 1.60e4
28.63
  • 28.63
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
1.64e4
  • 1.64e4
26.56
  • 26.56
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.83e4
  • 1.83e4
  • 2.08e4
18.24
  • 18.24
  • 7.08
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species14 genesCompare expression
Theria14 species15 genesCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000007280.

Cross-references

EnsemblENSCAFG00000007280 (RNF180)
HGNCHGNC:27752 (RNF180)
EMBLAAEX03001470
Uniprot/SPTREMBLE2R485, E2R485_CANLF

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