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C. lupus familiaris Gene: ASCL1 - ENSCAFG00000007324 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000007324
NameASCL1
Descriptionachaete-scute family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:738]
OrganismCanis lupus familiaris (dog)
Synonym(s)ash1, bhlha46, hash1
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
3.26e3
  • 3.26e3
85.44
  • 85.44
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
3.98e3
  • 3.98e3
  • 1.47e4
  • 1.51e4
  • 1.82e4
  • 2.08e4
82.19
  • 82.19
  • 34.27
  • 32.48
  • 18.74
  • 7.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.03e3
  • 4.03e3
  • 1.07e4
82.00
  • 82.00
  • 52.02
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
4.75e3
  • 4.75e3
78.76
  • 78.76
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
6.56e3
  • 6.56e3
70.68
  • 70.68
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
9.47e3
  • 9.47e3
57.65
  • 57.65
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.02e4
  • 1.02e4
54.26
  • 54.26
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
52.24
  • 52.24
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.11e4
  • 1.11e4
  • 1.13e4
50.36
  • 50.36
  • 49.39
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.14e4
  • 1.14e4
49.16
  • 49.16
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
  • 1.58e4
49.08
  • 49.08
  • 29.55
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
48.96
  • 48.96
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
43.82
  • 43.82
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
41.21
  • 41.21
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
  • 1.55e4
  • 2.00e4
35.86
  • 35.86
  • 30.91
  • 10.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
31.20
  • 31.20
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
31.18
  • 31.18
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
30.50
  • 30.50
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
30.37
  • 30.37
AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.58e4
  • 1.58e4
29.44
  • 29.44
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.59e4
  • 1.59e4
28.79
  • 28.79
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.60e4
  • 1.60e4
  • 1.76e4
28.48
  • 28.48
  • 21.34
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
27.54
  • 27.54
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.81e4
  • 1.81e4
19.23
  • 19.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria2 species2 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Euteleostomi13 species13 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000007324.

Cross-references

EnsemblENSCAFG00000007324 (ASCL1)
HGNCHGNC:738 (ASCL1)
Uniprot/SPTREMBLE2R359, E2R359_CANLF

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