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C. lupus familiaris Gene: SGTB - ENSCAFG00000007494 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000007494
NameSGTB
Descriptionsmall glutamine-rich tetratricopeptide repeat (TPR)-containing, beta [Source:HGNC Symbol;Acc:HGNC:23567]
OrganismCanis lupus familiaris (dog)
Synonym(s)flj39002, sgt2
Orthologs(s)23 orthologs
Paralog(s)361 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
1.02e3
  • 1.02e3
95.45
  • 95.45
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.02e3
  • 1.02e3
95.43
  • 95.43
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.11e3
  • 1.11e3
95.03
  • 95.03
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.52e3
  • 1.52e3
  • 3.20e3
93.22
  • 93.22
  • 85.69
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.80e3
  • 1.80e3
91.96
  • 91.96
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
2.44e3
  • 2.44e3
89.08
  • 89.08
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.58e3
  • 2.58e3
  • 3.62e3
88.48
  • 88.48
  • 83.81
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
2.86e3
  • 2.86e3
87.22
  • 87.22
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
3.24e3
  • 3.24e3
85.54
  • 85.54
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
3.46e3
  • 3.46e3
84.54
  • 84.54
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
3.70e3
  • 3.70e3
83.45
  • 83.45
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
5.12e3
  • 5.12e3
77.11
  • 77.11
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
6.14e3
  • 6.14e3
72.54
  • 72.54
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
6.16e3
  • 6.16e3
  • 7.74e3
  • 8.18e3
72.44
  • 72.44
  • 65.39
  • 63.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.28e3
  • 6.28e3
  • 7.83e3
71.94
  • 71.94
  • 64.98
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
6.32e3
  • 6.32e3
71.74
  • 71.74
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
6.43e3
  • 6.43e3
71.25
  • 71.25
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
6.44e3
  • 6.44e3
71.21
  • 71.21
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
6.46e3
  • 6.46e3
71.12
  • 71.12
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
6.62e3
  • 6.62e3
70.38
  • 70.38
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
6.75e3
  • 6.75e3
69.81
  • 69.81
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
7.04e3
  • 7.04e3
  • 7.84e3
68.51
  • 68.51
  • 64.96
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
7.05e3
  • 7.05e3
  • 8.16e3
68.49
  • 68.49
  • 63.53
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
7.06e3
  • 7.06e3
68.42
  • 68.42
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.15e3
  • 7.15e3
  • 8.12e3
68.04
  • 68.04
  • 63.68
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
7.39e3
  • 7.39e3
  • 1.05e4
66.97
  • 66.97
  • 52.91
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
7.58e3
  • 7.58e3
66.12
  • 66.12
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
7.70e3
  • 7.70e3
65.56
  • 65.56
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
7.71e3
  • 7.71e3
65.53
  • 65.53
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
7.77e3
  • 7.77e3
  • 8.77e3
  • 1.08e4
65.27
  • 65.27
  • 60.81
  • 51.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.23e3
  • 8.23e3
  • 1.08e4
63.21
  • 63.21
  • 51.80
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.56e3
  • 8.56e3
61.75
  • 61.75
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
8.65e3
  • 8.65e3
61.33
  • 61.33
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
8.71e3
  • 8.71e3
  • 9.38e3
61.07
  • 61.07
  • 58.07
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
8.79e3
  • 8.79e3
  • 1.33e4
60.71
  • 60.71
  • 40.36
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
8.81e3
  • 8.81e3
  • 1.07e4
60.59
  • 60.59
  • 52.22
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
8.86e3
  • 8.86e3
  • 9.01e3
60.40
  • 60.40
  • 59.73
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.86e3
  • 8.86e3
  • 1.14e4
60.38
  • 60.38
  • 49.22
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
8.90e3
  • 8.90e3
60.20
  • 60.20
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.27e3
  • 9.27e3
  • 1.08e4
  • 1.11e4
  • 1.29e4
  • 1.31e4
58.56
  • 58.56
  • 51.85
  • 50.30
  • 42.45
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
9.30e3
  • 9.30e3
58.42
  • 58.42
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.40e3
  • 9.40e3
  • 1.03e4
57.95
  • 57.95
  • 54.07
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
9.46e3
  • 9.46e3
57.72
  • 57.72
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
9.47e3
  • 9.47e3
57.65
  • 57.65
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
9.67e3
  • 9.67e3
56.76
  • 56.76
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
9.84e3
  • 9.84e3
56.02
  • 56.02
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
9.88e3
  • 9.88e3
55.84
  • 55.84
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
9.97e3
  • 9.97e3
  • 1.02e4
  • 1.03e4
55.43
  • 55.43
  • 54.32
  • 53.84
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
54.09
  • 54.09
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.04e4
  • 1.04e4
53.70
  • 53.70
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
49.43
  • 49.43
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
49.15
  • 49.15
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
45.12
  • 45.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000007494.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eukaryota361 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000007494.

Cross-references

EnsemblENSCAFG00000007494 (SGTB)
HGNCHGNC:23567 (SGTB)
EMBLAAEX03001473
Uniprot/SPTREMBLE2RDU2, E2RDU2_CANLF

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