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C. lupus familiaris Gene: PRG3 - ENSCAFG00000007892 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000007892
NamePRG3
Descriptionproteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:9363]
OrganismCanis lupus familiaris (dog)
Synonym(s)mbph
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.40e4
  • 1.40e4
37.40
  • 37.40
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
33.47
  • 33.47
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.51e4
  • 1.51e4
32.52
  • 32.52
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
  • 1.69e4
31.46
  • 31.46
  • 24.51
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
28.29
  • 28.29
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
28.18
  • 28.18
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
1.79e4
  • 1.79e4
19.93
  • 19.93
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.80e4
  • 1.80e4
19.62
  • 19.62
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
1.87e4
  • 1.87e4
16.22
  • 16.22
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species9 genesCompare expression
Boreoeutheria13 species17 genesCompare expression
Theria14 species18 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000007892.

Cross-references

EnsemblENSCAFG00000007892 (PRG3)
HGNCHGNC:9363 (PRG3)
EMBLAAEX03011447
Uniprot/SPTREMBLE2QX50, E2QX50_CANLF

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