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C. lupus familiaris Gene: TRPA1 - ENSCAFG00000007931 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000007931
NameTRPA1
Descriptiontransient receptor potential cation channel, subfamily A, member 1 [Source:HGNC Symbol;Acc:HGNC:497]
OrganismCanis lupus familiaris (dog)
Synonym(s)anktm1
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.42e3
  • 8.42e3
  • 1.01e4
62.35
  • 62.35
  • 54.72
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
9.43e3
  • 9.43e3
57.84
  • 57.84
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
9.48e3
  • 9.48e3
  • 1.35e4
57.62
  • 57.62
  • 39.77
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
50.70
  • 50.70
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
  • 1.48e4
50.40
  • 50.40
  • 33.87
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
49.71
  • 49.71
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
  • 1.26e4
48.15
  • 48.15
  • 43.47
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.24e4
  • 1.24e4
44.47
  • 44.47
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.38e4
  • 1.38e4
38.16
  • 38.16
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
36.23
  • 36.23
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
  • 1.52e4
  • 1.59e4
33.82
  • 33.82
  • 32.19
  • 28.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.52e4
  • 1.52e4
32.18
  • 32.18
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
31.96
  • 31.96
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.54e4
  • 1.54e4
31.31
  • 31.31
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
  • 1.90e4
25.34
  • 25.34
  • 14.96
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
25.28
  • 25.28
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.69e4
  • 1.69e4
24.55
  • 24.55
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.70e4
  • 1.70e4
  • 2.08e4
24.07
  • 24.07
  • 7.15
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
1.88e4
  • 1.88e4
15.84
  • 15.84
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species20 genesCompare expression
Bilateria25 species26 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000007931.

Cross-references

EnsemblENSCAFG00000007931 (TRPA1)
HGNCHGNC:497 (TRPA1)
EMBLAAEX03015864
Uniprot/SPTREMBLF1Q2M0, F1Q2M0_CANLF

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