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C. lupus familiaris Gene: HLTF - ENSCAFG00000008276 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000008276
NameHLTF
Descriptionhelicase-like transcription factor [Source:HGNC Symbol;Acc:HGNC:11099]
OrganismCanis lupus familiaris (dog)
Synonym(s)hip116a, hltf1, rnf80, smarca3, snf2l3
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
565
  • 565
  • 1.39e3
97.48
  • 97.48
  • 93.80
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.49e3
  • 1.49e3
93.35
  • 93.35
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.56e3
  • 1.56e3
  • 1.81e3
93.01
  • 93.01
  • 91.89
AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.58e3
  • 1.58e3
92.93
  • 92.93
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.69e3
  • 1.69e3
  • 5.20e3
92.45
  • 92.45
  • 76.74
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.90e3
  • 1.90e3
91.53
  • 91.53
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.03e3
  • 2.03e3
  • 3.26e3
90.92
  • 90.92
  • 85.43
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.06e3
  • 2.06e3
  • 3.08e3
90.80
  • 90.80
  • 86.22
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.33e3
  • 2.33e3
  • 2.88e3
89.59
  • 89.59
  • 87.10
AEIR
  • AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
2.54e3
  • 2.54e3
88.67
  • 88.67
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.59e3
  • 2.59e3
  • 3.36e3
88.43
  • 88.43
  • 84.96
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.59e3
  • 2.59e3
  • 2.65e3
88.42
  • 88.42
  • 88.15
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
2.64e3
  • 2.64e3
88.20
  • 88.20
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
2.67e3
  • 2.67e3
88.08
  • 88.08
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
2.69e3
  • 2.69e3
87.97
  • 87.97
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
2.73e3
  • 2.73e3
87.81
  • 87.81
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
2.74e3
  • 2.74e3
  • 3.24e3
87.76
  • 87.76
  • 85.51
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
2.76e3
  • 2.76e3
87.66
  • 87.66
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
2.87e3
  • 2.87e3
87.18
  • 87.18
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
2.89e3
  • 2.89e3
87.10
  • 87.10
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.98e3
  • 2.98e3
  • 4.81e3
  • 6.26e3
86.68
  • 86.68
  • 78.48
  • 72.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
3.09e3
  • 3.09e3
86.19
  • 86.19
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
3.17e3
  • 3.17e3
85.83
  • 85.83
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.18e3
  • 3.18e3
  • 3.18e3
85.80
  • 85.80
  • 85.78
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
3.22e3
  • 3.22e3
85.63
  • 85.63
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
3.32e3
  • 3.32e3
85.14
  • 85.14
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
3.35e3
  • 3.35e3
  • 9.58e3
85.04
  • 85.04
  • 57.16
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
3.35e3
  • 3.35e3
85.01
  • 85.01
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
3.39e3
  • 3.39e3
84.84
  • 84.84
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
3.40e3
  • 3.40e3
84.79
  • 84.79
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
3.48e3
  • 3.48e3
  • 4.10e3
  • 5.22e3
84.46
  • 84.46
  • 81.65
  • 76.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.52e3
  • 3.52e3
  • 5.88e3
84.28
  • 84.28
  • 73.70
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
3.78e3
  • 3.78e3
83.11
  • 83.11
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
3.83e3
  • 3.83e3
  • 3.91e3
  • 1.21e4
82.88
  • 82.88
  • 82.54
  • 45.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
3.88e3
  • 3.88e3
  • 6.98e3
82.67
  • 82.67
  • 68.80
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.93e3
  • 3.93e3
  • 6.22e3
82.43
  • 82.43
  • 72.19
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
3.95e3
  • 3.95e3
82.36
  • 82.36
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.10e3
  • 4.10e3
81.68
  • 81.68
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.22e3
  • 4.22e3
  • 4.47e3
  • 4.99e3
  • 6.64e3
  • 9.32e3
81.14
  • 81.14
  • 80.00
  • 77.68
  • 70.32
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
4.25e3
  • 4.25e3
  • 4.90e3
81.00
  • 81.00
  • 78.07
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
4.27e3
  • 4.27e3
80.92
  • 80.92
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
4.35e3
  • 4.35e3
80.53
  • 80.53
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
4.38e3
  • 4.38e3
80.43
  • 80.43
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
4.47e3
  • 4.47e3
80.02
  • 80.02
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
5.04e3
  • 5.04e3
77.47
  • 77.47
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.08e3
  • 5.08e3
  • 5.17e3
77.28
  • 77.28
  • 76.88
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.22e3
  • 5.22e3
76.65
  • 76.65
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
5.40e3
  • 5.40e3
75.86
  • 75.86
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
5.42e3
  • 5.42e3
75.77
  • 75.77
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
5.53e3
  • 5.53e3
75.26
  • 75.26
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
6.13e3
  • 6.13e3
72.59
  • 72.59
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
6.65e3
  • 6.65e3
70.29
  • 70.29
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
7.41e3
  • 7.41e3
66.86
  • 66.86
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
51.60
  • 51.60
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000008276.

Cross-references

EnsemblENSCAFG00000008276 (HLTF)
HGNCHGNC:11099 (HLTF)
EMBLAAEX03013671
Uniprot/SPTREMBLE2R9I5, E2R9I5_CANLF

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