We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

C. lupus familiaris Gene: CACNA1D - ENSCAFG00000008525 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000008525
NameCACNA1D
Descriptioncalcium channel, voltage-dependent, L type, alpha 1D subunit [Source:HGNC Symbol;Acc:HGNC:1391]
OrganismCanis lupus familiaris (dog)
Synonym(s)cach3, cacn4, cacnl1a2, cav1.3, cchl1a2
Orthologs(s)17 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.91e3
  • 3.91e3
  • 1.05e4
82.50
  • 82.50
  • 53.15
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.79e3
  • 5.79e3
  • 8.15e3
74.10
  • 74.10
  • 63.57
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
7.79e3
  • 7.79e3
  • 1.26e4
65.17
  • 65.17
  • 43.83
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
8.96e3
  • 8.96e3
59.96
  • 59.96
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
9.96e3
  • 9.96e3
  • 1.06e4
  • 1.17e4
55.48
  • 55.48
  • 52.54
  • 47.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
53.98
  • 53.98
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
53.42
  • 53.42
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
53.07
  • 53.07
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
  • 1.12e4
51.51
  • 51.51
  • 49.70
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.09e4
  • 1.09e4
51.09
  • 51.09
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
51.03
  • 51.03
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.12e4
  • 1.12e4
  • 1.40e4
49.81
  • 49.81
  • 37.21
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
1.13e4
  • 1.13e4
  • 1.17e4
  • 1.18e4
  • 1.29e4
  • 1.29e4
49.57
  • 49.57
  • 47.67
  • 47.22
  • 42.44
  • 42.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.17e4
  • 1.17e4
47.87
  • 47.87
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
46.36
  • 46.36
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
  • 1.25e4
45.31
  • 45.31
  • 44.05
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
44.85
  • 44.85
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.24e4
  • 1.24e4
  • 1.29e4
  • 1.34e4
44.36
  • 44.36
  • 42.48
  • 40.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
44.17
  • 44.17
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
  • 1.34e4
43.23
  • 43.23
  • 40.24
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.28e4
  • 1.28e4
42.91
  • 42.91
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.31e4
  • 1.31e4
41.43
  • 41.43
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
41.08
  • 41.08
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
40.88
  • 40.88
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.37e4
  • 1.37e4
38.55
  • 38.55
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
37.88
  • 37.88
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
36.97
  • 36.97
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.41e4
  • 1.41e4
36.75
  • 36.75
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
36.73
  • 36.73
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.42e4
  • 1.42e4
  • 1.42e4
36.68
  • 36.68
  • 36.56
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
  • 1.61e4
36.31
  • 36.31
  • 28.09
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.43e4
  • 1.43e4
  • 1.50e4
  • 1.52e4
36.18
  • 36.18
  • 33.12
  • 31.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.43e4
  • 1.43e4
36.12
  • 36.12
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
35.32
  • 35.32
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
  • 1.54e4
35.16
  • 35.16
  • 31.10
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.45e4
  • 1.45e4
34.98
  • 34.98
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
34.33
  • 34.33
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.47e4
  • 1.47e4
  • 1.60e4
34.12
  • 34.12
  • 28.35
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
  • 1.54e4
32.97
  • 32.97
  • 31.15
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
32.15
  • 32.15
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.52e4
  • 1.52e4
32.13
  • 32.13
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.53e4
  • 1.53e4
31.56
  • 31.56
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
30.69
  • 30.69
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.56e4
  • 1.56e4
30.22
  • 30.22
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
27.57
  • 27.57
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
27.51
  • 27.51
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria17 species17 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000008525.

Paralogs (same species)

Paralogy information comes from OMA : ENSCAFG00000008525.

Cross-references

Do not show this banner again