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C. lupus familiaris Gene: SLIT1 - ENSCAFG00000008945 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000008945
NameSLIT1
Descriptionslit guidance ligand 1 [Source:HGNC Symbol;Acc:HGNC:11085]
OrganismCanis lupus familiaris (dog)
Synonym(s)megf4, slil1, slit-1, slit1, slit3
Orthologs(s)21 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.29e3
  • 2.29e3
89.76
  • 89.76
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
2.94e3
  • 2.94e3
86.86
  • 86.86
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
3.38e3
  • 3.38e3
84.91
  • 84.91
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
3.85e3
  • 3.85e3
82.80
  • 82.80
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
6.85e3
  • 6.85e3
69.37
  • 69.37
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
6.92e3
  • 6.92e3
69.06
  • 69.06
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
7.00e3
  • 7.00e3
68.72
  • 68.72
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
7.58e3
  • 7.58e3
66.09
  • 66.09
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
7.78e3
  • 7.78e3
65.23
  • 65.23
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
8.72e3
  • 8.72e3
61.01
  • 61.01
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.89e3
  • 8.89e3
  • 9.33e3
60.24
  • 60.24
  • 58.26
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
9.52e3
  • 9.52e3
57.42
  • 57.42
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
1.13e4
  • 1.13e4
  • 1.28e4
  • 1.28e4
  • 1.37e4
  • 1.39e4
49.68
  • 49.68
  • 42.74
  • 42.69
  • 38.91
  • 38.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
48.60
  • 48.60
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
44.53
  • 44.53
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.24e4
  • 1.24e4
  • 1.29e4
44.43
  • 44.43
  • 42.11
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
  • 1.52e4
  • 1.58e4
42.22
  • 42.22
  • 31.95
  • 29.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
  • 1.74e4
41.81
  • 41.81
  • 22.08
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
  • 1.62e4
41.73
  • 41.73
  • 27.67
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
  • 1.43e4
40.95
  • 40.95
  • 36.23
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.33e4
  • 1.33e4
40.60
  • 40.60
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
  • 1.34e4
40.38
  • 40.38
  • 40.20
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
40.00
  • 40.00
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.34e4
  • 1.34e4
39.90
  • 39.90
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
36.56
  • 36.56
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
36.42
  • 36.42
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
  • 1.68e4
35.56
  • 35.56
  • 25.05
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
  • 1.46e4
35.45
  • 35.45
  • 34.71
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
35.34
  • 35.34
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
35.19
  • 35.19
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
34.31
  • 34.31
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
34.27
  • 34.27
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
33.05
  • 33.05
AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
32.73
  • 32.73
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.51e4
  • 1.51e4
  • 1.59e4
32.37
  • 32.37
  • 29.00
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.52e4
  • 1.52e4
  • 1.54e4
32.15
  • 32.15
  • 31.35
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.54e4
  • 1.54e4
31.21
  • 31.21
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
  • 1.58e4
29.70
  • 29.70
  • 29.48
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
28.57
  • 28.57
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
28.08
  • 28.08
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression
Bilateria21 species21 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000008945.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000008945.

Cross-references

EnsemblENSCAFG00000008945 (SLIT1)
HGNCHGNC:11085 (SLIT1)
EMBLAAEX03015440
Uniprot/SPTREMBLF1PSS7, F1PSS7_CANLF

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