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C. lupus familiaris Gene: PGAM1 - ENSCAFG00000009062 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000009062
NamePGAM1
Descriptionphosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
OrganismCanis lupus familiaris (dog)
Synonym(s)pgam-b, pgama
Orthologs(s)31 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
99.6
  • 99.6
  • 2.93e3
99.56
  • 99.56
  • 86.92
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
114
  • 114
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
114
  • 114
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
117
  • 117
99.48
  • 99.48
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
126
  • 126
99.44
  • 99.44
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
154
  • 154
99.32
  • 99.32
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
154
  • 154
99.32
  • 99.32
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
159
  • 159
99.29
  • 99.29
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
172
  • 172
99.24
  • 99.24
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
190
  • 190
99.15
  • 99.15
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
196
  • 196
99.13
  • 99.13
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
207
  • 207
99.08
  • 99.08
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
208
  • 208
  • 278
99.07
  • 99.07
  • 98.76
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
224
  • 224
99.00
  • 99.00
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
226
  • 226
  • 419
98.99
  • 98.99
  • 98.13
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
228
  • 228
  • 285
98.99
  • 98.99
  • 98.73
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
231
  • 231
98.97
  • 98.97
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
243
  • 243
  • 881
98.92
  • 98.92
  • 96.06
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
252
  • 252
  • 492
  • 757
98.88
  • 98.88
  • 97.80
  • 96.62
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
286
  • 286
98.73
  • 98.73
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
298
  • 298
  • 495
  • 577
98.67
  • 98.67
  • 97.79
  • 97.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
309
  • 309
98.62
  • 98.62
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
310
  • 310
98.62
  • 98.62
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
323
  • 323
  • 400
98.56
  • 98.56
  • 98.22
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
323
  • 323
98.56
  • 98.56
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
344
  • 344
98.47
  • 98.47
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
366
  • 366
  • 400
  • 555
  • 625
  • 645
98.37
  • 98.37
  • 98.22
  • 97.52
  • 97.21
  • 97.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
370
  • 370
98.35
  • 98.35
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
370
  • 370
98.35
  • 98.35
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
430
  • 430
98.08
  • 98.08
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
431
  • 431
98.08
  • 98.08
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
435
  • 435
  • 461
98.06
  • 98.06
  • 97.94
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
439
  • 439
  • 608
  • 800
98.04
  • 98.04
  • 97.29
  • 96.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
457
  • 457
  • 684
97.96
  • 97.96
  • 96.95
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
464
  • 464
97.93
  • 97.93
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
464
  • 464
97.93
  • 97.93
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
467
  • 467
97.92
  • 97.92
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
484
  • 484
  • 491
97.84
  • 97.84
  • 97.81
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
485
  • 485
  • 603
97.84
  • 97.84
  • 97.31
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
485
  • 485
97.84
  • 97.84
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
512
  • 512
  • 593
97.71
  • 97.71
  • 97.35
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
526
  • 526
97.65
  • 97.65
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
529
  • 529
97.64
  • 97.64
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
533
  • 533
  • 558
97.62
  • 97.62
  • 97.51
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
578
  • 578
  • 1.97e3
97.42
  • 97.42
  • 91.18
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
628
  • 628
  • 1.80e3
97.20
  • 97.20
  • 91.93
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
635
  • 635
97.16
  • 97.16
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
641
  • 641
97.14
  • 97.14
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
665
  • 665
97.03
  • 97.03
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
690
  • 690
96.92
  • 96.92
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
694
  • 694
96.90
  • 96.90
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
732
  • 732
96.73
  • 96.73
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
814
  • 814
96.36
  • 96.36
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.40e3
  • 1.40e3
93.75
  • 93.75
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.53e3
  • 1.53e3
93.18
  • 93.18
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.53e3
  • 1.53e3
  • 2.08e3
93.15
  • 93.15
  • 90.70
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species14 genesCompare expression
Mammalia14 species15 genesCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species20 genesCompare expression
Bilateria24 species31 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000009062.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Opisthokonta2 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000009062.

Cross-references

EnsemblENSCAFG00000009062 (PGAM1)
HGNCHGNC:8888 (PGAM1)
EMBLAAEX03015445
Uniprot/SPTREMBLE2RT65, E2RT65_CANLF

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