C. lupus familiaris Gene: TPH1 - ENSCAFG00000009091 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000009091
NameTPH1
Descriptiontryptophan hydroxylase 1 [Source:HGNC Symbol;Acc:HGNC:12008]
OrganismCanis lupus familiaris (dog)
Synonym(s)tph, tprh
Orthologs(s)24 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
7.37e3
  • 7.37e3
  • 1.29e4
67.04
  • 67.04
  • 42.45
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
7.43e3
  • 7.43e3
66.77
  • 66.77
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
9.02e3
  • 9.02e3
  • 1.48e4
59.69
  • 59.69
  • 33.60
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
  • 1.20e4
54.41
  • 54.41
  • 46.20
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
  • 1.49e4
50.35
  • 50.35
  • 33.42
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
46.76
  • 46.76
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.38e4
44.48
  • 44.48
  • 38.22
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.48e4
  • 1.48e4
33.86
  • 33.86
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
32.87
  • 32.87
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
  • 2.09e4
29.46
  • 29.46
  • 6.61
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.61e4
  • 1.61e4
28.11
  • 28.11
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
27.12
  • 27.12
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
26.88
  • 26.88
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.82e4
  • 1.82e4
18.58
  • 18.58
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000009091.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eukaryota3 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000009091.

Cross-references

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