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C. lupus familiaris Gene: TSPAN18 - ENSCAFG00000009416 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000009416
NameTSPAN18
Descriptiontetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
OrganismCanis lupus familiaris (dog)
Synonym(s)tspan
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
2.03e3
  • 2.03e3
90.93
  • 90.93
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
2.23e3
  • 2.23e3
  • 3.65e3
90.02
  • 90.02
  • 83.67
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
2.31e3
  • 2.31e3
89.68
  • 89.68
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
2.59e3
  • 2.59e3
  • 3.39e3
  • 4.72e3
88.42
  • 88.42
  • 84.84
  • 78.91
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
3.59e3
  • 3.59e3
83.94
  • 83.94
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.62e3
  • 3.62e3
  • 8.62e3
83.84
  • 83.84
  • 61.45
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
4.27e3
  • 4.27e3
80.92
  • 80.92
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
4.48e3
  • 4.48e3
79.95
  • 79.95
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.21e3
  • 5.21e3
  • 7.29e3
76.72
  • 76.72
  • 67.40
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
5.71e3
  • 5.71e3
  • 6.58e3
74.49
  • 74.49
  • 70.56
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.76e3
  • 5.76e3
  • 1.32e4
74.27
  • 74.27
  • 40.85
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
5.80e3
  • 5.80e3
  • 6.77e3
74.08
  • 74.08
  • 69.72
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.80e3
  • 5.80e3
  • 6.03e3
74.06
  • 74.06
  • 73.06
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.16e3
  • 6.16e3
  • 1.32e4
72.48
  • 72.48
  • 40.94
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.18e3
  • 6.18e3
  • 1.22e4
72.37
  • 72.37
  • 45.56
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.33e3
  • 6.33e3
  • 8.89e3
71.70
  • 71.70
  • 60.23
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.41e3
  • 6.41e3
71.33
  • 71.33
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
6.46e3
  • 6.46e3
71.10
  • 71.10
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.53e3
  • 6.53e3
  • 9.68e3
70.82
  • 70.82
  • 56.73
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
7.13e3
  • 7.13e3
68.14
  • 68.14
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
7.16e3
  • 7.16e3
68.00
  • 68.00
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.70e3
  • 7.70e3
  • 1.04e4
  • 1.30e4
65.59
  • 65.59
  • 53.49
  • 41.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.83e3
  • 7.83e3
  • 1.26e4
65.01
  • 65.01
  • 43.79
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.87e3
  • 7.87e3
  • 1.05e4
64.80
  • 64.80
  • 53.22
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
7.91e3
  • 7.91e3
  • 1.03e4
64.63
  • 64.63
  • 54.08
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
8.11e3
  • 8.11e3
63.76
  • 63.76
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.53e3
  • 8.53e3
  • 1.05e4
  • 1.14e4
  • 1.16e4
  • 1.17e4
61.87
  • 61.87
  • 53.06
  • 49.11
  • 48.32
  • 47.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
8.56e3
  • 8.56e3
61.74
  • 61.74
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
8.63e3
  • 8.63e3
61.41
  • 61.41
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.68e3
  • 8.68e3
  • 9.99e3
  • 1.07e4
61.18
  • 61.18
  • 55.34
  • 52.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
8.76e3
  • 8.76e3
60.82
  • 60.82
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
9.00e3
  • 9.00e3
59.78
  • 59.78
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
9.29e3
  • 9.29e3
58.45
  • 58.45
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.30e3
  • 9.30e3
  • 9.55e3
58.41
  • 58.41
  • 57.30
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
9.40e3
  • 9.40e3
57.99
  • 57.99
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
9.67e3
  • 9.67e3
56.77
  • 56.77
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
54.31
  • 54.31
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.03e4
  • 1.03e4
53.99
  • 53.99
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
52.89
  • 52.89
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
51.62
  • 51.62
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
51.30
  • 51.30
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
50.83
  • 50.83
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
49.16
  • 49.16
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
48.17
  • 48.17
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
48.04
  • 48.04
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
44.35
  • 44.35
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
39.57
  • 39.57
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.36e4
  • 1.36e4
39.04
  • 39.04
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.39e4
  • 1.39e4
37.85
  • 37.85
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
36.91
  • 36.91
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
35.71
  • 35.71
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
35.45
  • 35.45
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
31.15
  • 31.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000009416.

Cross-references

EnsemblENSCAFG00000009416 (TSPAN18)
HGNCHGNC:20660 (TSPAN18)
EMBLAAEX03011515
Uniprot/SPTREMBLE2R9R7, E2R9R7_CANLF

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