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C. lupus familiaris Gene: SLC10A6 - ENSCAFG00000009448 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000009448
NameSLC10A6
Descriptionsolute carrier family 10 (sodium/bile acid cotransporter), member 6 [Source:HGNC Symbol;Acc:HGNC:30603]
OrganismCanis lupus familiaris (dog)
Synonym(s)soat
Orthologs(s)15 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000312keratinocyte
  • UBERON:0000104life cycle
3.22e3
  • 3.22e3
85.60
  • 85.60
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.56e3
  • 3.56e3
  • 6.64e3
84.07
  • 84.07
  • 70.31
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.80e3
  • 3.80e3
  • 1.19e4
83.02
  • 83.02
  • 46.65
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
4.94e3
  • 4.94e3
77.91
  • 77.91
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
5.56e3
  • 5.56e3
75.14
  • 75.14
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
6.27e3
  • 6.27e3
71.98
  • 71.98
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
6.53e3
  • 6.53e3
70.79
  • 70.79
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.86e3
  • 6.86e3
  • 8.24e3
69.35
  • 69.35
  • 63.17
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
6.88e3
  • 6.88e3
69.26
  • 69.26
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
7.19e3
  • 7.19e3
67.85
  • 67.85
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
7.44e3
  • 7.44e3
  • 1.17e4
66.74
  • 66.74
  • 47.87
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
7.47e3
  • 7.47e3
66.58
  • 66.58
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
7.75e3
  • 7.75e3
65.35
  • 65.35
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
7.77e3
  • 7.77e3
65.24
  • 65.24
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
8.17e3
  • 8.17e3
  • 1.02e4
  • 1.26e4
63.49
  • 63.49
  • 54.36
  • 43.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
8.24e3
  • 8.24e3
63.15
  • 63.15
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.65e3
  • 8.65e3
  • 9.56e3
61.32
  • 61.32
  • 57.24
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.75e3
  • 8.75e3
  • 9.77e3
60.88
  • 60.88
  • 56.30
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
8.82e3
  • 8.82e3
60.57
  • 60.57
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
9.05e3
  • 9.05e3
  • 1.01e4
  • 1.13e4
59.55
  • 59.55
  • 54.67
  • 49.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
9.07e3
  • 9.07e3
59.45
  • 59.45
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.21e3
  • 9.21e3
  • 1.05e4
58.84
  • 58.84
  • 52.86
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
9.22e3
  • 9.22e3
  • 1.17e4
58.77
  • 58.77
  • 47.49
AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
9.28e3
  • 9.28e3
58.50
  • 58.50
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
9.37e3
  • 9.37e3
58.10
  • 58.10
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
9.49e3
  • 9.49e3
  • 9.62e3
57.59
  • 57.59
  • 56.97
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
9.49e3
  • 9.49e3
57.55
  • 57.55
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
9.68e3
  • 9.68e3
  • 1.16e4
  • 1.18e4
56.73
  • 56.73
  • 47.98
  • 47.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
9.78e3
  • 9.78e3
56.29
  • 56.29
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.02e4
  • 1.02e4
  • 1.09e4
54.44
  • 54.44
  • 51.27
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
54.22
  • 54.22
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
  • 1.25e4
53.60
  • 53.60
  • 44.07
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
53.48
  • 53.48
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.07e4
  • 1.07e4
52.31
  • 52.31
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.07e4
  • 1.07e4
51.96
  • 51.96
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
50.66
  • 50.66
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
  • 1.20e4
49.84
  • 49.84
  • 46.25
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
  • 1.24e4
49.71
  • 49.71
  • 44.41
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.12e4
  • 1.12e4
49.71
  • 49.71
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.14e4
  • 1.14e4
48.89
  • 48.89
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.16e4
  • 1.16e4
  • 1.37e4
  • 1.38e4
  • 1.44e4
  • 1.65e4
48.24
  • 48.24
  • 38.70
  • 38.47
  • 35.68
  • 26.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
47.94
  • 47.94
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.17e4
  • 1.17e4
47.75
  • 47.75
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
  • 1.31e4
46.81
  • 46.81
  • 41.56
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
43.69
  • 43.69
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
42.02
  • 42.02
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
41.17
  • 41.17
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
38.58
  • 38.58
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.38e4
  • 1.38e4
38.24
  • 38.24
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
37.70
  • 37.70
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
36.64
  • 36.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000009448.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eukaryota2 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000009448.

Cross-references

EnsemblENSCAFG00000009448 (SLC10A6)
HGNCHGNC:30603 (SLC10A6)
EMBLAAEX03016743
Uniprot/SPTREMBLF1PLP1, F1PLP1_CANLF

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