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C. lupus familiaris Gene: PHACTR1 - ENSCAFG00000009809 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000009809
NamePHACTR1
Descriptionphosphatase and actin regulator 1 [Source:HGNC Symbol;Acc:HGNC:20990]
OrganismCanis lupus familiaris (dog)
Synonym(s)dj257a7.2, kiaa1733, rpel1
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
467
  • 467
  • 2.20e3
97.92
  • 97.92
  • 90.17
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.15e3
  • 1.15e3
  • 7.23e3
94.87
  • 94.87
  • 67.65
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.33e3
  • 1.33e3
94.03
  • 94.03
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.39e3
  • 1.39e3
  • 2.28e3
  • 1.17e4
93.79
  • 93.79
  • 89.81
  • 47.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.41e3
  • 1.41e3
93.68
  • 93.68
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.80e3
  • 1.80e3
91.97
  • 91.97
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.90e3
  • 1.90e3
91.53
  • 91.53
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
3.33e3
  • 3.33e3
85.13
  • 85.13
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
4.15e3
  • 4.15e3
81.45
  • 81.45
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
4.28e3
  • 4.28e3
80.88
  • 80.88
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
4.84e3
  • 4.84e3
78.36
  • 78.36
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.96e3
  • 4.96e3
  • 7.12e3
  • 9.57e3
77.85
  • 77.85
  • 68.19
  • 57.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
5.48e3
  • 5.48e3
  • 5.60e3
75.52
  • 75.52
  • 74.98
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.69e3
  • 5.69e3
  • 9.67e3
74.56
  • 74.56
  • 56.78
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
6.36e3
  • 6.36e3
71.58
  • 71.58
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.91e3
  • 6.91e3
  • 8.21e3
69.08
  • 69.08
  • 63.31
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.39e3
  • 7.39e3
  • 1.00e4
66.97
  • 66.97
  • 55.12
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
7.62e3
  • 7.62e3
65.93
  • 65.93
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
7.65e3
  • 7.65e3
65.80
  • 65.80
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.86e3
  • 8.86e3
  • 1.17e4
  • 1.19e4
60.40
  • 60.40
  • 47.68
  • 46.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.98e3
  • 8.98e3
  • 1.29e4
59.85
  • 59.85
  • 42.14
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.99e3
  • 8.99e3
  • 1.21e4
  • 1.21e4
  • 1.27e4
  • 1.32e4
59.82
  • 59.82
  • 45.93
  • 45.80
  • 43.17
  • 41.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
9.08e3
  • 9.08e3
59.38
  • 59.38
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.22e3
  • 9.22e3
  • 1.28e4
58.77
  • 58.77
  • 42.72
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
9.25e3
  • 9.25e3
  • 1.06e4
58.62
  • 58.62
  • 52.39
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
9.29e3
  • 9.29e3
58.46
  • 58.46
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
9.43e3
  • 9.43e3
57.82
  • 57.82
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
9.50e3
  • 9.50e3
57.53
  • 57.53
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
9.88e3
  • 9.88e3
55.80
  • 55.80
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
  • 1.29e4
54.81
  • 54.81
  • 42.20
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
54.37
  • 54.37
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
1.02e4
  • 1.02e4
54.34
  • 54.34
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
53.94
  • 53.94
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.04e4
  • 1.04e4
53.61
  • 53.61
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.05e4
  • 1.05e4
52.94
  • 52.94
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.06e4
  • 1.06e4
  • 1.09e4
52.78
  • 52.78
  • 51.06
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.07e4
  • 1.07e4
  • 1.08e4
52.23
  • 52.23
  • 51.49
AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
51.86
  • 51.86
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.08e4
  • 1.08e4
51.76
  • 51.76
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
51.45
  • 51.45
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
51.40
  • 51.40
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
50.59
  • 50.59
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.12e4
  • 1.12e4
  • 1.28e4
49.88
  • 49.88
  • 42.86
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
  • 1.18e4
48.31
  • 48.31
  • 47.12
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
  • 1.21e4
47.88
  • 47.88
  • 45.78
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
46.21
  • 46.21
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
  • 1.21e4
46.03
  • 46.03
  • 45.74
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
45.82
  • 45.82
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
43.20
  • 43.20
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
42.32
  • 42.32
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.31e4
  • 1.31e4
41.51
  • 41.51
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
39.96
  • 39.96
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
36.00
  • 36.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000009809.

Cross-references

EnsemblENSCAFG00000009809 (PHACTR1)
HGNCHGNC:20990 (PHACTR1)
EMBLAAEX03017542, AAEX03017543
Uniprot/SPTREMBLF1P9K7, F1P9K7_CANLF

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