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C. lupus familiaris Gene: ABCD2 - ENSCAFG00000010022 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000010022
NameABCD2
DescriptionATP binding cassette subfamily D member 2 [Source:HGNC Symbol;Acc:HGNC:66]
OrganismCanis lupus familiaris (dog)
Synonym(s)aldl1, aldr, aldrp
Orthologs(s)24 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
2.08e3
  • 2.08e3
90.72
  • 90.72
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.11e3
  • 3.11e3
  • 8.53e3
86.08
  • 86.08
  • 61.85
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
5.41e3
  • 5.41e3
  • 1.55e4
75.82
  • 75.82
  • 30.53
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
7.33e3
  • 7.33e3
67.22
  • 67.22
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
8.21e3
  • 8.21e3
63.31
  • 63.31
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
9.99e3
  • 9.99e3
55.35
  • 55.35
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
  • 1.27e4
52.69
  • 52.69
  • 43.15
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
  • 1.23e4
52.46
  • 52.46
  • 44.99
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
52.36
  • 52.36
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
50.99
  • 50.99
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.10e4
  • 1.10e4
50.75
  • 50.75
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
  • 1.25e4
49.98
  • 49.98
  • 44.22
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
48.93
  • 48.93
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.69e4
47.30
  • 47.30
  • 24.59
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
43.96
  • 43.96
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
  • 1.52e4
43.71
  • 43.71
  • 32.12
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
43.37
  • 43.37
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
  • 1.43e4
42.46
  • 42.46
  • 35.84
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
41.97
  • 41.97
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.31e4
  • 1.31e4
  • 1.43e4
41.53
  • 41.53
  • 36.21
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.32e4
  • 1.32e4
  • 1.37e4
41.10
  • 41.10
  • 38.93
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.38e4
  • 1.38e4
38.16
  • 38.16
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.41e4
  • 1.41e4
37.05
  • 37.05
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
36.86
  • 36.86
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
36.84
  • 36.84
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
34.76
  • 34.76
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.53e4
  • 1.53e4
31.68
  • 31.68
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
  • 1.58e4
  • 1.60e4
31.02
  • 31.02
  • 29.50
  • 28.28
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.55e4
  • 1.55e4
30.75
  • 30.75
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
29.67
  • 29.67
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
  • 1.85e4
27.57
  • 27.57
  • 17.15
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.66e4
  • 1.66e4
25.92
  • 25.92
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
  • 1.90e4
22.76
  • 22.76
  • 15.12
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
1.79e4
  • 1.79e4
20.04
  • 20.04
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000010022.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Opisthokonta3 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000010022.

Cross-references

EnsemblENSCAFG00000010022 (ABCD2)
HGNCHGNC:66 (ABCD2)
EMBLAAEX03015139, AAEX03015140, AAEX03015141
Uniprot/SPTREMBLE2RG61, E2RG61_CANLF

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