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C. lupus familiaris Gene: SEMA5A - ENSCAFG00000010102 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000010102
NameSEMA5A
Descriptionsema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A [Source:HGNC Symbol;Acc:HGNC:10736]
OrganismCanis lupus familiaris (dog)
Synonym(s)semaf, semf
Orthologs(s)23 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.12e3
  • 2.12e3
90.52
  • 90.52
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
2.41e3
  • 2.41e3
89.22
  • 89.22
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
5.10e3
  • 5.10e3
77.21
  • 77.21
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.38e3
  • 5.38e3
  • 1.14e4
75.96
  • 75.96
  • 48.92
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
5.55e3
  • 5.55e3
75.18
  • 75.18
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.19e3
  • 6.19e3
72.32
  • 72.32
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.05e3
  • 7.05e3
68.46
  • 68.46
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
7.42e3
  • 7.42e3
  • 8.95e3
66.81
  • 66.81
  • 60.00
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.52e3
  • 7.52e3
  • 1.22e4
66.36
  • 66.36
  • 45.53
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.99e3
  • 7.99e3
  • 8.37e3
  • 1.13e4
64.28
  • 64.28
  • 62.55
  • 49.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.11e3
  • 8.11e3
  • 9.84e3
63.75
  • 63.75
  • 56.00
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
8.78e3
  • 8.78e3
  • 1.15e4
60.75
  • 60.75
  • 48.65
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
8.86e3
  • 8.86e3
60.40
  • 60.40
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.26e3
  • 9.26e3
  • 1.31e4
58.60
  • 58.60
  • 41.50
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.27e3
  • 9.27e3
  • 1.35e4
58.55
  • 58.55
  • 39.44
AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
9.29e3
  • 9.29e3
58.44
  • 58.44
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
9.36e3
  • 9.36e3
58.15
  • 58.15
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
  • 1.05e4
  • 1.15e4
  • 1.22e4
  • 1.34e4
55.04
  • 55.04
  • 53.04
  • 48.56
  • 45.28
  • 39.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
54.76
  • 54.76
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
54.75
  • 54.75
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.01e4
  • 1.01e4
54.73
  • 54.73
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.03e4
  • 1.03e4
54.13
  • 54.13
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.04e4
  • 1.04e4
53.67
  • 53.67
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.06e4
  • 1.06e4
52.56
  • 52.56
AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
52.52
  • 52.52
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
1.09e4
  • 1.09e4
51.35
  • 51.35
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
51.10
  • 51.10
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
  • 1.28e4
51.00
  • 51.00
  • 42.57
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.10e4
  • 1.10e4
  • 1.26e4
50.85
  • 50.85
  • 43.79
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.13e4
  • 1.13e4
49.26
  • 49.26
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
48.95
  • 48.95
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.15e4
  • 1.15e4
48.55
  • 48.55
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
48.48
  • 48.48
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.16e4
  • 1.16e4
48.09
  • 48.09
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.19e4
  • 1.19e4
  • 1.19e4
  • 1.54e4
46.71
  • 46.71
  • 46.58
  • 31.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
45.85
  • 45.85
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
44.39
  • 44.39
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
44.21
  • 44.21
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.25e4
  • 1.25e4
  • 1.42e4
43.99
  • 43.99
  • 36.50
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
43.77
  • 43.77
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
  • 1.34e4
42.59
  • 42.59
  • 39.94
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
42.43
  • 42.43
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
42.39
  • 42.39
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
  • 1.30e4
41.98
  • 41.98
  • 41.73
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.30e4
  • 1.30e4
41.79
  • 41.79
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
  • 1.43e4
  • 1.47e4
40.89
  • 40.89
  • 36.10
  • 34.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
39.14
  • 39.14
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.39e4
  • 1.39e4
37.93
  • 37.93
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.40e4
  • 1.40e4
37.57
  • 37.57
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.45e4
  • 1.45e4
  • 1.53e4
35.05
  • 35.05
  • 31.76
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
32.32
  • 32.32
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.53e4
  • 1.53e4
31.80
  • 31.80
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.58e4
  • 1.58e4
29.29
  • 29.29
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000010102.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSCAFG00000010102.

Cross-references

EnsemblENSCAFG00000010102 (SEMA5A)
HGNCHGNC:10736 (SEMA5A)
EMBLAAEX03017160, AAEX03017161, AAEX03017162
Uniprot/SPTREMBLF1PBV7, F1PBV7_CANLF

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