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C. lupus familiaris Gene: GCN1 - ENSCAFG00000010203 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000010203
NameGCN1
DescriptionGCN1, eIF2 alpha kinase activator homolog [Source:HGNC Symbol;Acc:HGNC:4199]
OrganismCanis lupus familiaris (dog)
Synonym(s)gcn1l, gcn1l1, kiaa0219
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
4.15e3
  • 4.15e3
81.45
  • 81.45
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.17e3
  • 4.17e3
  • 5.86e3
81.36
  • 81.36
  • 73.81
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
4.20e3
  • 4.20e3
  • 8.36e3
81.20
  • 81.20
  • 62.64
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
4.65e3
  • 4.65e3
79.20
  • 79.20
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.08e3
  • 5.08e3
  • 5.72e3
  • 6.17e3
  • 7.23e3
  • 9.47e3
77.27
  • 77.27
  • 74.42
  • 72.42
  • 67.67
  • 57.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
5.19e3
  • 5.19e3
76.81
  • 76.81
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.37e3
  • 5.37e3
75.99
  • 75.99
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
5.40e3
  • 5.40e3
75.84
  • 75.84
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
5.44e3
  • 5.44e3
75.69
  • 75.69
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.95e3
  • 5.95e3
  • 6.41e3
  • 9.57e3
73.39
  • 73.39
  • 71.34
  • 57.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
6.34e3
  • 6.34e3
  • 9.05e3
71.67
  • 71.67
  • 59.54
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.48e3
  • 6.48e3
  • 7.09e3
  • 9.67e3
71.03
  • 71.03
  • 68.31
  • 56.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.50e3
  • 6.50e3
  • 7.45e3
70.94
  • 70.94
  • 66.67
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
6.53e3
  • 6.53e3
70.79
  • 70.79
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.54e3
  • 6.54e3
  • 8.99e3
70.77
  • 70.77
  • 59.78
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
6.67e3
  • 6.67e3
70.18
  • 70.18
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.67e3
  • 6.67e3
  • 7.90e3
70.17
  • 70.17
  • 64.69
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.94e3
  • 6.94e3
  • 7.87e3
  • 9.90e3
68.99
  • 68.99
  • 64.83
  • 55.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
6.94e3
  • 6.94e3
  • 6.99e3
68.98
  • 68.98
  • 68.76
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
6.96e3
  • 6.96e3
  • 7.01e3
68.86
  • 68.86
  • 68.65
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
6.98e3
  • 6.98e3
68.79
  • 68.79
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
7.04e3
  • 7.04e3
68.52
  • 68.52
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.05e3
  • 7.05e3
  • 8.81e3
68.48
  • 68.48
  • 60.62
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.08e3
  • 7.08e3
  • 8.98e3
68.33
  • 68.33
  • 59.86
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.15e3
  • 7.15e3
  • 9.50e3
68.03
  • 68.03
  • 57.51
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
7.16e3
  • 7.16e3
67.98
  • 67.98
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.29e3
  • 7.29e3
  • 8.90e3
67.41
  • 67.41
  • 60.22
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
7.36e3
  • 7.36e3
67.07
  • 67.07
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.40e3
  • 7.40e3
  • 8.83e3
66.92
  • 66.92
  • 60.53
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.51e3
  • 7.51e3
  • 7.53e3
66.43
  • 66.43
  • 66.34
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
7.55e3
  • 7.55e3
66.24
  • 66.24
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.58e3
  • 7.58e3
66.11
  • 66.11
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.78e3
  • 7.78e3
65.23
  • 65.23
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
7.82e3
  • 7.82e3
65.03
  • 65.03
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
7.84e3
  • 7.84e3
64.95
  • 64.95
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
7.88e3
  • 7.88e3
64.76
  • 64.76
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
7.89e3
  • 7.89e3
64.74
  • 64.74
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
7.90e3
  • 7.90e3
64.68
  • 64.68
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
7.98e3
  • 7.98e3
64.30
  • 64.30
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
8.01e3
  • 8.01e3
64.19
  • 64.19
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.06e3
  • 8.06e3
63.98
  • 63.98
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
8.23e3
  • 8.23e3
63.18
  • 63.18
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
8.25e3
  • 8.25e3
63.10
  • 63.10
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
8.30e3
  • 8.30e3
62.88
  • 62.88
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.34e3
  • 8.34e3
  • 8.36e3
62.72
  • 62.72
  • 62.61
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
8.44e3
  • 8.44e3
62.26
  • 62.26
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
8.61e3
  • 8.61e3
61.50
  • 61.50
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
8.64e3
  • 8.64e3
61.37
  • 61.37
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
9.01e3
  • 9.01e3
59.70
  • 59.70
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
9.13e3
  • 9.13e3
59.16
  • 59.16
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
9.29e3
  • 9.29e3
58.47
  • 58.47
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
9.44e3
  • 9.44e3
57.79
  • 57.79
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
9.53e3
  • 9.53e3
57.39
  • 57.39
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
9.92e3
  • 9.92e3
55.65
  • 55.65
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
55.23
  • 55.23
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
51.45
  • 51.45
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria19 species19 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000010203.

Cross-references

EnsemblENSCAFG00000010203 (GCN1)
HGNCHGNC:4199 (GCN1)
EMBLAAEX03014732
Uniprot/SPTREMBLF1PUY0, F1PUY0_CANLF, J9NXV2, J9NXV2_CANLF

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