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C. lupus familiaris Gene: SLC4A10 - ENSCAFG00000010242 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000010242
NameSLC4A10
Descriptionsolute carrier family 4, sodium bicarbonate transporter, member 10 [Source:HGNC Symbol;Acc:HGNC:13811]
OrganismCanis lupus familiaris (dog)
Synonym(s)nbcn2, ncbe
Orthologs(s)26 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
899
  • 899
95.98
  • 95.98
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
1.62e3
  • 1.62e3
92.76
  • 92.76
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.63e3
  • 1.63e3
  • 3.75e3
92.72
  • 92.72
  • 83.24
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.65e3
  • 1.65e3
92.64
  • 92.64
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.02e3
  • 2.02e3
90.98
  • 90.98
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
2.28e3
  • 2.28e3
89.79
  • 89.79
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
4.22e3
  • 4.22e3
81.14
  • 81.14
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.94e3
  • 6.94e3
68.97
  • 68.97
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.93e3
  • 7.93e3
  • 1.38e4
64.53
  • 64.53
  • 38.18
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
8.09e3
  • 8.09e3
63.84
  • 63.84
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
8.88e3
  • 8.88e3
60.28
  • 60.28
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.17e4
  • 1.17e4
  • 1.51e4
  • 1.56e4
47.83
  • 47.83
  • 32.39
  • 30.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
41.77
  • 41.77
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.32e4
  • 1.32e4
41.12
  • 41.12
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
38.04
  • 38.04
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.47e4
  • 1.47e4
34.17
  • 34.17
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
31.08
  • 31.08
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
30.19
  • 30.19
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.64e4
  • 1.64e4
  • 1.78e4
  • 1.78e4
26.62
  • 26.62
  • 20.48
  • 20.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
  • 1.81e4
26.43
  • 26.43
  • 18.90
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
20.64
  • 20.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression
Bilateria25 species26 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000010242.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Bilateria4 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000010242.

Cross-references

EnsemblENSCAFG00000010242 (SLC4A10)
HGNCHGNC:13811 (SLC4A10)
EMBLAAEX03017713, AAEX03017714
Uniprot/SPTREMBLE2RJ38, E2RJ38_CANLF

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