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C. lupus familiaris Gene: PPFIA4 - ENSCAFG00000010321 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000010321
NamePPFIA4
Descriptionprotein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:HGNC Symbol;Acc:HGNC:9248]
OrganismCanis lupus familiaris (dog)
Orthologs(s)23 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.08e3
  • 1.08e3
  • 3.52e3
95.17
  • 95.17
  • 84.24
AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
1.75e3
  • 1.75e3
92.17
  • 92.17
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
2.27e3
  • 2.27e3
89.84
  • 89.84
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
3.25e3
  • 3.25e3
85.45
  • 85.45
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.29e3
  • 3.29e3
85.29
  • 85.29
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
3.35e3
  • 3.35e3
85.01
  • 85.01
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.85e3
  • 3.85e3
  • 7.06e3
82.78
  • 82.78
  • 68.41
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
3.90e3
  • 3.90e3
82.56
  • 82.56
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
4.45e3
  • 4.45e3
80.12
  • 80.12
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.21e3
  • 5.21e3
  • 6.92e3
76.71
  • 76.71
  • 69.04
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
6.28e3
  • 6.28e3
71.93
  • 71.93
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
6.48e3
  • 6.48e3
71.01
  • 71.01
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
6.59e3
  • 6.59e3
  • 1.25e4
70.54
  • 70.54
  • 44.14
AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
6.89e3
  • 6.89e3
69.17
  • 69.17
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.12e3
  • 7.12e3
  • 1.11e4
68.17
  • 68.17
  • 50.57
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.36e3
  • 7.36e3
  • 7.96e3
67.10
  • 67.10
  • 64.43
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
7.52e3
  • 7.52e3
66.38
  • 66.38
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
8.27e3
  • 8.27e3
63.03
  • 63.03
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
8.67e3
  • 8.67e3
61.22
  • 61.22
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
8.81e3
  • 8.81e3
60.60
  • 60.60
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
9.20e3
  • 9.20e3
58.86
  • 58.86
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
9.40e3
  • 9.40e3
57.95
  • 57.95
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
9.96e3
  • 9.96e3
55.49
  • 55.49
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
  • 1.28e4
  • 1.38e4
53.23
  • 53.23
  • 42.87
  • 38.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.08e4
  • 1.08e4
  • 1.38e4
51.82
  • 51.82
  • 38.25
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.09e4
  • 1.09e4
  • 1.38e4
51.13
  • 51.13
  • 38.48
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
50.81
  • 50.81
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
50.65
  • 50.65
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
50.38
  • 50.38
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
49.50
  • 49.50
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
  • 1.40e4
48.69
  • 48.69
  • 37.62
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.22e4
  • 1.22e4
  • 1.30e4
45.40
  • 45.40
  • 41.99
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.23e4
  • 1.23e4
  • 1.34e4
44.86
  • 44.86
  • 40.02
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
44.74
  • 44.74
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.25e4
  • 1.25e4
  • 1.40e4
44.24
  • 44.24
  • 37.29
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.26e4
  • 1.26e4
43.68
  • 43.68
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.27e4
  • 1.27e4
43.41
  • 43.41
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
  • 1.32e4
42.50
  • 42.50
  • 40.83
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.29e4
  • 1.29e4
42.43
  • 42.43
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
  • 1.36e4
  • 1.42e4
42.16
  • 42.16
  • 39.25
  • 36.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.32e4
  • 1.32e4
  • 1.34e4
  • 1.41e4
  • 1.43e4
  • 1.49e4
40.82
  • 40.82
  • 40.14
  • 37.07
  • 35.94
  • 33.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.33e4
  • 1.33e4
40.65
  • 40.65
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
40.44
  • 40.44
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
39.53
  • 39.53
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.37e4
  • 1.37e4
  • 1.44e4
  • 1.51e4
38.56
  • 38.56
  • 35.63
  • 32.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.42e4
  • 1.42e4
36.67
  • 36.67
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
36.19
  • 36.19
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
  • 1.54e4
35.03
  • 35.03
  • 31.02
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.46e4
  • 1.46e4
34.63
  • 34.63
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.47e4
  • 1.47e4
34.39
  • 34.39
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.47e4
  • 1.47e4
34.25
  • 34.25
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.55e4
  • 1.55e4
30.47
  • 30.47
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000010321.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Bilateria3 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000010321.

Cross-references

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