C. lupus familiaris Gene: COL4A4 - ENSCAFG00000010423 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000010423
NameCOL4A4
Descriptioncollagen, type IV, alpha 4 [Source:HGNC Symbol;Acc:HGNC:2206]
OrganismCanis lupus familiaris (dog)
Synonym(s)ca44

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000104life cycle
5.37e3
  • 5.37e3
75.97989
  • 75.97989
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.85e3
  • 5.85e3
  • 1.09e4
73.81883
  • 73.81883
  • 51.21552
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
7.11e3
  • 7.11e3
68.16228
  • 68.16228
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
7.83e3
  • 7.83e3
64.96059
  • 64.96059
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.10e3
  • 8.10e3
  • 1.27e4
63.71574
  • 63.71574
  • 43.09395
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
8.39e3
  • 8.39e3
62.41716
  • 62.41716
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
8.90e3
  • 8.90e3
  • 1.24e4
  • 1.39e4
60.13344
  • 60.13344
  • 44.68028
  • 37.59175
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
1.06e4
  • 1.06e4
  • 1.20e4
  • 1.36e4
  • 1.40e4
52.33759
  • 52.33759
  • 46.48486
  • 39.31547
  • 37.50672
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
49.38872
  • 49.38872
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.13e4
  • 1.13e4
49.25219
  • 49.25219
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
47.21924
  • 47.21924
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.19e4
  • 1.19e4
  • 1.21e4
46.54514
  • 46.54514
  • 45.71019
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
46.03121
  • 46.03121
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.28e4
  • 1.28e4
42.89361
  • 42.89361
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.28e4
  • 1.28e4
42.63528
  • 42.63528
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
1.30e4
  • 1.30e4
41.76518
  • 41.76518
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
41.01290
  • 41.01290
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
  • 1.62e4
40.60093
  • 40.60093
  • 27.50085
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
  • 1.50e4
40.50242
  • 40.50242
  • 32.82733
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
  • 1.39e4
40.24270
  • 40.24270
  • 37.90525
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
40.15485
  • 40.15485
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
39.70088
  • 39.70088
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.39e4
  • 1.39e4
37.79778
  • 37.79778
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.41e4
  • 1.41e4
  • 1.58e4
36.91022
  • 36.91022
  • 29.21368
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
36.32903
  • 36.32903
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
35.81856
  • 35.81856
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
  • 1.47e4
35.80257
  • 35.80257
  • 34.20079
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
  • 1.49e4
35.16926
  • 35.16926
  • 33.39365
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
34.99055
  • 34.99055
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
  • 1.58e4
34.00054
  • 34.00054
  • 29.42862
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
33.92441
  • 33.92441
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.49e4
  • 1.49e4
33.08705
  • 33.08705
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.50e4
  • 1.50e4
32.97510
  • 32.97510
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.51e4
  • 1.51e4
  • 1.57e4
32.17356
  • 32.17356
  • 29.64477
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.52e4
  • 1.52e4
  • 1.53e4
31.85787
  • 31.85787
  • 31.67204
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
1.54e4
  • 1.54e4
31.05857
  • 31.05857
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.56e4
  • 1.56e4
30.32868
  • 30.32868
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.56e4
  • 1.56e4
30.01970
  • 30.01970
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
27.61956
  • 27.61956
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
  • 1.67e4
27.55239
  • 27.55239
  • 25.10299
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.64e4
  • 1.64e4
26.68126
  • 26.68126
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
26.44622
  • 26.44622
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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