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C. lupus familiaris Gene: CALHM1 - ENSCAFG00000010454 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000010454
NameCALHM1
Descriptioncalcium homeostasis modulator 1 [Source:HGNC Symbol;Acc:HGNC:23494]
OrganismCanis lupus familiaris (dog)
Synonym(s)fam26c
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
8.26e3
  • 8.26e3
63.08
  • 63.08
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
48.28
  • 48.28
AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
47.11
  • 47.11
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
42.46
  • 42.46
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.38e4
  • 1.38e4
  • 1.58e4
38.32
  • 38.32
  • 29.34
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
38.18
  • 38.18
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
35.63
  • 35.63
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
32.90
  • 32.90
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
32.58
  • 32.58
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000010454.

Cross-references

EnsemblENSCAFG00000010454 (CALHM1)
HGNCHGNC:23494 (CALHM1)
EMBLAAEX03015499
Uniprot/SPTREMBLF1PLK6, F1PLK6_CANLF

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