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C. lupus familiaris Gene: SHANK2 - ENSCAFG00000010458 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000010458
NameSHANK2
DescriptionSH3 and multiple ankyrin repeat domains 2 [Source:HGNC Symbol;Acc:HGNC:14295]
OrganismCanis lupus familiaris (dog)
Synonym(s)cortbp1, cttnbp1, prosap1, shank, spank-3
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.23e3
  • 4.23e3
  • 6.38e3
  • 9.95e3
81.09
  • 81.09
  • 71.47
  • 55.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
6.00e3
  • 6.00e3
  • 9.10e3
  • 9.69e3
  • 1.19e4
  • 1.26e4
73.18
  • 73.18
  • 59.29
  • 56.66
  • 46.86
  • 43.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
6.77e3
  • 6.77e3
69.71
  • 69.71
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.03e3
  • 7.03e3
  • 1.42e4
68.58
  • 68.58
  • 36.72
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.15e3
  • 7.15e3
68.01
  • 68.01
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
7.35e3
  • 7.35e3
67.12
  • 67.12
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
7.43e3
  • 7.43e3
66.78
  • 66.78
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
7.90e3
  • 7.90e3
64.66
  • 64.66
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.78e3
  • 8.78e3
  • 1.08e4
60.74
  • 60.74
  • 51.79
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
9.53e3
  • 9.53e3
57.39
  • 57.39
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.08e4
  • 1.08e4
51.55
  • 51.55
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.12e4
  • 1.12e4
  • 1.38e4
49.82
  • 49.82
  • 38.37
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
48.12
  • 48.12
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
  • 1.48e4
  • 1.60e4
45.88
  • 45.88
  • 33.90
  • 28.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
44.54
  • 44.54
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
43.60
  • 43.60
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.27e4
  • 1.27e4
  • 1.33e4
42.99
  • 42.99
  • 40.46
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.30e4
  • 1.30e4
41.79
  • 41.79
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.34e4
  • 1.34e4
40.23
  • 40.23
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.38e4
  • 1.38e4
38.47
  • 38.47
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.40e4
  • 1.40e4
37.43
  • 37.43
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
37.29
  • 37.29
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.40e4
  • 1.40e4
  • 1.55e4
37.20
  • 37.20
  • 30.56
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
34.90
  • 34.90
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
34.52
  • 34.52
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
31.88
  • 31.88
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
30.77
  • 30.77
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
29.65
  • 29.65
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
25.30
  • 25.30
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.72e4
  • 1.72e4
  • 1.78e4
23.05
  • 23.05
  • 20.51
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria2 species2 genesCompare expression
Boreoeutheria10 species11 genesCompare expression
Theria11 species12 genesCompare expression
Mammalia12 species13 genesCompare expression
Amniota14 species15 genesCompare expression
Tetrapoda15 species16 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000010458.

Cross-references

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