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C. lupus familiaris Gene: C4orf17 - ENSCAFG00000010531 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000010531
NameC4orf17
Descriptionchromosome 4 open reading frame 17 [Source:HGNC Symbol;Acc:HGNC:25274]
OrganismCanis lupus familiaris (dog)
Synonym(s)dkfzp434g072
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
3.97e3
  • 3.97e3
82.27
  • 82.27
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.36e4
  • 1.36e4
39.33
  • 39.33
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
  • 1.78e4
38.93
  • 38.93
  • 20.48
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
36.62
  • 36.62
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.45e4
  • 1.45e4
  • 1.47e4
  • 1.50e4
  • 1.62e4
35.20
  • 35.20
  • 34.30
  • 32.74
  • 27.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
1.55e4
  • 1.55e4
30.88
  • 30.88
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.56e4
  • 1.56e4
30.24
  • 30.24
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.60e4
  • 1.60e4
28.49
  • 28.49
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.63e4
  • 1.63e4
27.09
  • 27.09
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
25.87
  • 25.87
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.71e4
  • 1.71e4
  • 1.75e4
23.76
  • 23.76
  • 21.68
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
1.73e4
  • 1.73e4
22.78
  • 22.78
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
22.74
  • 22.74
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.84e4
  • 1.84e4
17.71
  • 17.71
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.86e4
  • 1.86e4
16.66
  • 16.66
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.88e4
  • 1.88e4
16.15
  • 16.15
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.88e4
  • 1.88e4
15.71
  • 15.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000010531.

Cross-references

EnsemblENSCAFG00000010531 (C4orf17)
HGNCHGNC:25274 (C4orf17)
EMBLAAEX03016783, AAEX03016784
Uniprot/SPTREMBLE2RGU6, E2RGU6_CANLF

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