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C. lupus familiaris Gene: RRP1 - ENSCAFG00000010646 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000010646
NameRRP1
Descriptionribosomal RNA processing 1 [Source:HGNC Symbol;Acc:HGNC:18785]
OrganismCanis lupus familiaris (dog)
Synonym(s)d21s2056e, nnp-1, nop52, rrp1a
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.66e3
  • 1.66e3
  • 4.85e3
92.60
  • 92.60
  • 78.34
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
2.51e3
  • 2.51e3
88.76
  • 88.76
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.66e3
  • 2.66e3
  • 3.79e3
88.11
  • 88.11
  • 83.04
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.75e3
  • 2.75e3
87.71
  • 87.71
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.80e3
  • 2.80e3
  • 3.46e3
87.49
  • 87.49
  • 84.52
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
2.90e3
  • 2.90e3
87.03
  • 87.03
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.93e3
  • 2.93e3
  • 3.54e3
  • 4.10e3
86.92
  • 86.92
  • 84.17
  • 81.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.15e3
  • 3.15e3
  • 4.73e3
85.91
  • 85.91
  • 78.84
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
3.22e3
  • 3.22e3
85.63
  • 85.63
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
3.25e3
  • 3.25e3
  • 4.49e3
85.47
  • 85.47
  • 79.94
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
3.26e3
  • 3.26e3
85.44
  • 85.44
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
3.28e3
  • 3.28e3
85.33
  • 85.33
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
3.32e3
  • 3.32e3
85.15
  • 85.15
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
3.34e3
  • 3.34e3
85.06
  • 85.06
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
3.39e3
  • 3.39e3
84.86
  • 84.86
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
3.39e3
  • 3.39e3
  • 3.61e3
84.86
  • 84.86
  • 83.84
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.40e3
  • 3.40e3
  • 4.85e3
84.80
  • 84.80
  • 78.33
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
3.50e3
  • 3.50e3
84.33
  • 84.33
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.52e3
  • 3.52e3
  • 4.07e3
  • 4.09e3
  • 4.66e3
  • 4.82e3
84.25
  • 84.25
  • 81.79
  • 81.72
  • 79.17
  • 78.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
3.60e3
  • 3.60e3
  • 3.65e3
  • 4.06e3
83.92
  • 83.92
  • 83.70
  • 81.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
3.61e3
  • 3.61e3
83.85
  • 83.85
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
3.63e3
  • 3.63e3
83.79
  • 83.79
AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
3.66e3
  • 3.66e3
83.63
  • 83.63
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.77e3
  • 3.77e3
  • 5.02e3
83.15
  • 83.15
  • 77.55
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
3.79e3
  • 3.79e3
83.05
  • 83.05
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
3.86e3
  • 3.86e3
82.75
  • 82.75
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
3.90e3
  • 3.90e3
82.56
  • 82.56
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
3.93e3
  • 3.93e3
82.41
  • 82.41
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.95e3
  • 3.95e3
  • 5.12e3
82.35
  • 82.35
  • 77.09
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.98e3
  • 3.98e3
  • 7.98e3
82.20
  • 82.20
  • 64.32
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.98e3
  • 3.98e3
  • 4.23e3
82.19
  • 82.19
  • 81.09
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
4.08e3
  • 4.08e3
81.74
  • 81.74
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
4.20e3
  • 4.20e3
  • 7.36e3
81.23
  • 81.23
  • 67.07
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.25e3
  • 4.25e3
81.00
  • 81.00
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
4.26e3
  • 4.26e3
  • 5.19e3
80.96
  • 80.96
  • 76.78
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
4.26e3
  • 4.26e3
80.95
  • 80.95
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
4.32e3
  • 4.32e3
  • 4.35e3
  • 4.50e3
80.67
  • 80.67
  • 80.54
  • 79.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
4.54e3
  • 4.54e3
79.72
  • 79.72
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
4.57e3
  • 4.57e3
79.56
  • 79.56
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
4.58e3
  • 4.58e3
79.53
  • 79.53
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
4.69e3
  • 4.69e3
79.05
  • 79.05
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
4.70e3
  • 4.70e3
79.00
  • 79.00
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
4.76e3
  • 4.76e3
78.72
  • 78.72
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.93e3
  • 4.93e3
  • 5.69e3
77.98
  • 77.98
  • 74.57
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
4.93e3
  • 4.93e3
77.97
  • 77.97
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
4.94e3
  • 4.94e3
77.93
  • 77.93
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
5.05e3
  • 5.05e3
77.40
  • 77.40
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.09e3
  • 5.09e3
  • 5.14e3
77.26
  • 77.26
  • 77.02
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
5.09e3
  • 5.09e3
77.24
  • 77.24
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
5.35e3
  • 5.35e3
  • 6.57e3
76.06
  • 76.06
  • 70.61
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
5.49e3
  • 5.49e3
75.46
  • 75.46
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
5.56e3
  • 5.56e3
75.12
  • 75.12
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
6.23e3
  • 6.23e3
72.13
  • 72.13
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
6.34e3
  • 6.34e3
71.66
  • 71.66
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
6.54e3
  • 6.54e3
70.76
  • 70.76
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000010646.

Cross-references

EnsemblENSCAFG00000010646 (RRP1)
HGNCHGNC:18785 (RRP1)
EMBLAAEX03016621
Uniprot/SPTREMBLE2R592, E2R592_CANLF, J9NWY3, J9NWY3_CANLF

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