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C. lupus familiaris Gene: RBM20 - ENSCAFG00000010785 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000010785
NameRBM20
DescriptionRNA binding motif protein 20 [Source:HGNC Symbol;Acc:HGNC:27424]
OrganismCanis lupus familiaris (dog)
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.03e3
  • 1.03e3
95.41
  • 95.41
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
2.01e3
  • 2.01e3
  • 5.38e3
91.00
  • 91.00
  • 75.93
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.16e3
  • 2.16e3
  • 2.63e3
90.35
  • 90.35
  • 88.24
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.77e3
  • 2.77e3
  • 2.86e3
87.61
  • 87.61
  • 87.20
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
3.50e3
  • 3.50e3
84.37
  • 84.37
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
3.66e3
  • 3.66e3
83.62
  • 83.62
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.22e3
  • 4.22e3
  • 5.50e3
81.12
  • 81.12
  • 75.39
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
4.22e3
  • 4.22e3
81.11
  • 81.11
AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
8.50e3
  • 8.50e3
61.98
  • 61.98
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.83e3
  • 8.83e3
  • 1.60e4
60.53
  • 60.53
  • 28.52
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
9.06e3
  • 9.06e3
59.47
  • 59.47
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
9.92e3
  • 9.92e3
  • 1.49e4
55.62
  • 55.62
  • 33.45
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
42.92
  • 42.92
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
42.32
  • 42.32
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.30e4
  • 1.30e4
41.89
  • 41.89
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
  • 1.45e4
41.27
  • 41.27
  • 34.99
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
40.75
  • 40.75
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.40e4
  • 1.40e4
37.41
  • 37.41
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
36.77
  • 36.77
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.43e4
  • 1.43e4
  • 1.55e4
36.11
  • 36.11
  • 30.74
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
  • 1.57e4
35.95
  • 35.95
  • 29.80
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.46e4
  • 1.46e4
  • 1.51e4
34.84
  • 34.84
  • 32.26
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
  • 1.56e4
  • 1.66e4
  • 1.68e4
34.79
  • 34.79
  • 30.11
  • 25.74
  • 25.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.46e4
  • 1.46e4
34.59
  • 34.59
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.46e4
  • 1.46e4
34.58
  • 34.58
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
33.88
  • 33.88
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
  • 1.71e4
33.78
  • 33.78
  • 23.62
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
32.92
  • 32.92
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
32.67
  • 32.67
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.52e4
  • 1.52e4
  • 1.69e4
31.92
  • 31.92
  • 24.41
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.52e4
  • 1.52e4
31.89
  • 31.89
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
  • 1.60e4
  • 1.75e4
30.58
  • 30.58
  • 28.56
  • 21.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.56e4
  • 1.56e4
  • 1.61e4
  • 1.71e4
30.37
  • 30.37
  • 27.95
  • 23.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.56e4
  • 1.56e4
30.30
  • 30.30
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.59e4
  • 1.59e4
29.12
  • 29.12
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.60e4
  • 1.60e4
  • 1.64e4
28.30
  • 28.30
  • 26.72
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
28.22
  • 28.22
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
27.62
  • 27.62
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
27.46
  • 27.46
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
27.31
  • 27.31
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.65e4
  • 1.65e4
26.12
  • 26.12
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
1.70e4
  • 1.70e4
23.93
  • 23.93
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.74e4
  • 1.74e4
22.25
  • 22.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000010785.

Cross-references

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