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C. lupus familiaris Gene: TMEM39A - ENSCAFG00000010926 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000010926
NameTMEM39A
Descriptiontransmembrane protein 39A [Source:HGNC Symbol;Acc:HGNC:25600]
OrganismCanis lupus familiaris (dog)
Synonym(s)flj10902
Orthologs(s)25 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.27e3
  • 1.27e3
  • 5.97e3
94.34
  • 94.34
  • 73.29
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.95e3
  • 1.95e3
  • 2.04e3
  • 3.59e3
91.28
  • 91.28
  • 90.89
  • 83.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
3.69e3
  • 3.69e3
83.48
  • 83.48
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
3.70e3
  • 3.70e3
83.47
  • 83.47
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.01e3
  • 4.01e3
  • 4.84e3
  • 5.54e3
  • 6.30e3
  • 6.67e3
82.06
  • 82.06
  • 78.35
  • 75.22
  • 71.83
  • 70.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.19e3
  • 4.19e3
  • 6.56e3
81.29
  • 81.29
  • 70.66
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.28e3
  • 4.28e3
  • 5.32e3
  • 6.23e3
80.85
  • 80.85
  • 76.20
  • 72.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.36e3
  • 4.36e3
  • 5.66e3
80.48
  • 80.48
  • 74.69
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
4.39e3
  • 4.39e3
  • 5.43e3
80.38
  • 80.38
  • 75.74
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
4.68e3
  • 4.68e3
79.06
  • 79.06
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
4.74e3
  • 4.74e3
78.82
  • 78.82
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
4.74e3
  • 4.74e3
  • 5.42e3
78.82
  • 78.82
  • 75.76
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.74e3
  • 4.74e3
  • 5.50e3
  • 5.83e3
78.81
  • 78.81
  • 75.42
  • 73.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
4.79e3
  • 4.79e3
  • 8.21e3
78.59
  • 78.59
  • 63.29
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
4.79e3
  • 4.79e3
  • 7.64e3
78.57
  • 78.57
  • 65.86
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
5.05e3
  • 5.05e3
77.43
  • 77.43
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.10e3
  • 5.10e3
  • 5.61e3
77.22
  • 77.22
  • 74.92
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
5.53e3
  • 5.53e3
75.26
  • 75.26
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
5.61e3
  • 5.61e3
74.93
  • 74.93
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
5.65e3
  • 5.65e3
74.76
  • 74.76
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
5.67e3
  • 5.67e3
74.66
  • 74.66
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
5.76e3
  • 5.76e3
74.26
  • 74.26
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
5.81e3
  • 5.81e3
74.04
  • 74.04
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
5.87e3
  • 5.87e3
73.77
  • 73.77
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
5.95e3
  • 5.95e3
73.40
  • 73.40
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
5.99e3
  • 5.99e3
73.23
  • 73.23
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.99e3
  • 5.99e3
  • 6.10e3
73.23
  • 73.23
  • 72.72
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.01e3
  • 6.01e3
73.14
  • 73.14
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
6.02e3
  • 6.02e3
73.08
  • 73.08
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
6.04e3
  • 6.04e3
72.98
  • 72.98
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
6.07e3
  • 6.07e3
72.87
  • 72.87
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
6.11e3
  • 6.11e3
72.69
  • 72.69
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
6.18e3
  • 6.18e3
72.39
  • 72.39
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.23e3
  • 6.23e3
  • 6.38e3
72.16
  • 72.16
  • 71.46
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
6.30e3
  • 6.30e3
71.84
  • 71.84
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.31e3
  • 6.31e3
  • 6.74e3
71.79
  • 71.79
  • 69.89
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
6.32e3
  • 6.32e3
71.73
  • 71.73
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
6.46e3
  • 6.46e3
71.13
  • 71.13
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
6.50e3
  • 6.50e3
70.95
  • 70.95
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
6.70e3
  • 6.70e3
70.06
  • 70.06
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.75e3
  • 6.75e3
  • 7.40e3
69.80
  • 69.80
  • 66.92
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
7.16e3
  • 7.16e3
67.99
  • 67.99
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.36e3
  • 7.36e3
  • 7.64e3
67.08
  • 67.08
  • 65.85
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
7.58e3
  • 7.58e3
66.10
  • 66.10
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.07e3
  • 8.07e3
  • 8.18e3
63.90
  • 63.90
  • 63.42
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
8.17e3
  • 8.17e3
63.45
  • 63.45
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
8.41e3
  • 8.41e3
62.38
  • 62.38
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
8.65e3
  • 8.65e3
61.33
  • 61.33
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
9.50e3
  • 9.50e3
57.51
  • 57.51
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
9.82e3
  • 9.82e3
56.08
  • 56.08
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.00e4
  • 1.00e4
55.07
  • 55.07
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
54.26
  • 54.26
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.12e4
  • 1.12e4
49.81
  • 49.81
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
49.36
  • 49.36
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
46.96
  • 46.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000010926.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSCAFG00000010926.

Cross-references

EnsemblENSCAFG00000010926 (TMEM39A)
HGNCHGNC:25600 (TMEM39A)
EMBLAAEX03017014
Uniprot/SPTREMBLE2R861, E2R861_CANLF

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