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C. lupus familiaris Gene: WBSCR17 - ENSCAFG00000011150 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000011150
NameWBSCR17
DescriptionWilliams-Beuren syndrome chromosome region 17 [Source:HGNC Symbol;Acc:HGNC:16347]
OrganismCanis lupus familiaris (dog)
Synonym(s)galnac-t5l, galntl3
Orthologs(s)8 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
916
  • 916
95.91
  • 95.91
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.07e3
  • 1.07e3
95.23
  • 95.23
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
1.08e3
  • 1.08e3
95.16
  • 95.16
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.21e3
  • 1.21e3
94.57
  • 94.57
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.31e3
  • 1.31e3
94.16
  • 94.16
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.50e3
  • 1.50e3
93.30
  • 93.30
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.79e3
  • 1.79e3
92.02
  • 92.02
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.28e3
  • 3.28e3
  • 3.33e3
85.32
  • 85.32
  • 85.13
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
5.43e3
  • 5.43e3
75.72
  • 75.72
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.44e3
  • 5.44e3
  • 6.49e3
75.70
  • 75.70
  • 70.97
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
5.58e3
  • 5.58e3
75.05
  • 75.05
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
6.70e3
  • 6.70e3
70.04
  • 70.04
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
6.76e3
  • 6.76e3
69.79
  • 69.79
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
6.88e3
  • 6.88e3
69.22
  • 69.22
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
6.92e3
  • 6.92e3
69.07
  • 69.07
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
7.31e3
  • 7.31e3
67.30
  • 67.30
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.65e3
  • 7.65e3
  • 9.91e3
65.81
  • 65.81
  • 55.69
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
8.29e3
  • 8.29e3
62.93
  • 62.93
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
8.52e3
  • 8.52e3
61.91
  • 61.91
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
9.68e3
  • 9.68e3
56.71
  • 56.71
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
9.92e3
  • 9.92e3
55.62
  • 55.62
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.01e4
  • 1.01e4
  • 1.01e4
54.96
  • 54.96
  • 54.82
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
  • 1.06e4
54.46
  • 54.46
  • 52.64
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.02e4
  • 1.02e4
54.34
  • 54.34
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.10e4
  • 1.10e4
50.61
  • 50.61
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
  • 1.64e4
46.91
  • 46.91
  • 26.77
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
  • 1.36e4
  • 1.38e4
46.02
  • 46.02
  • 39.00
  • 38.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
  • 1.26e4
45.95
  • 45.95
  • 43.81
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
  • 1.27e4
45.61
  • 45.61
  • 43.26
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.22e4
  • 1.22e4
  • 1.49e4
45.43
  • 45.43
  • 33.33
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.22e4
  • 1.22e4
  • 1.40e4
  • 1.52e4
45.36
  • 45.36
  • 37.44
  • 32.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
45.15
  • 45.15
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.24e4
  • 1.24e4
  • 1.31e4
44.57
  • 44.57
  • 41.47
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
43.40
  • 43.40
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
43.17
  • 43.17
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
42.70
  • 42.70
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
  • 1.48e4
41.13
  • 41.13
  • 33.85
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
40.19
  • 40.19
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.35e4
  • 1.35e4
39.78
  • 39.78
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
39.24
  • 39.24
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.40e4
  • 1.40e4
37.41
  • 37.41
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.42e4
  • 1.42e4
  • 1.47e4
36.54
  • 36.54
  • 34.33
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.43e4
  • 1.43e4
36.04
  • 36.04
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
34.77
  • 34.77
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
  • 1.55e4
33.28
  • 33.28
  • 30.47
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
  • 1.54e4
  • 1.65e4
32.98
  • 32.98
  • 31.33
  • 26.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
  • 1.57e4
32.81
  • 32.81
  • 29.94
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.50e4
  • 1.50e4
32.77
  • 32.77
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
  • 1.56e4
  • 1.61e4
  • 1.73e4
31.78
  • 31.78
  • 30.44
  • 27.90
  • 22.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.54e4
  • 1.54e4
30.92
  • 30.92
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.55e4
  • 1.55e4
30.76
  • 30.76
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.56e4
  • 1.56e4
30.31
  • 30.31
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.66e4
  • 1.66e4
25.87
  • 25.87
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.76e4
  • 1.76e4
21.44
  • 21.44
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Laurasiatheria1 geneCompare expression

Paralogy information comes from OMA : ENSCAFG00000011150.

Cross-references

EnsemblENSCAFG00000011150 (WBSCR17)
HGNCHGNC:16347 (WBSCR17)
EMBLAAEX03004199, AAEX03004200, AAEX03004201
Uniprot/SPTREMBLF1PXQ6, F1PXQ6_CANLF

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